RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 MYOCOSA0A1B0GUC4 107 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 H0Y626 953 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 C8BP07358 591 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 ALPIP09923 528 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 APLP1P51693 650 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 ATP6V0D1P61421 351 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 GRM2Q14416 872 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 NRF1Q16656 503 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 THEMIS2Q5TEJ8 643 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 CHST9Q7L1S5 443 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 MIER2Q8N344 545 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 TTC30BQ8N4P2 665 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 ADCY4Q8NFM4 1077 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 CD200R1Q8TD46 325 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 ADGRE3Q9BY15 652 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 CWH43Q9H720 699 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 SPATS2LQ9NUQ6 558 aaKnown RBP17.24■□□□□ 0.35
LRFN3-201ENST00000246529 MRGBPQ9NV56 204 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 PCDH10Q9P2E7 1040 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 LHX3Q9UBR4 397 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 TRMT6Q9UJA5 497 aaKnown RBP17.24■□□□□ 0.35
LRFN3-201ENST00000246529 YIPF1Q9Y548 306 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 VPS26AO75436 327 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 EFEMP2O95967 443 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 RPS17P08708 135 aaKnown RBP17.24■□□□□ 0.35
LRFN3-201ENST00000246529 ZXDBP98169 803 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 RHDQ02161 417 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 NCEH1Q6PIU2 408 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 AUTS2Q8WXX7 1259 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 TEX37Q96LM6 180 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 TCF12Q99081 682 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 AFF4Q9UHB7 1163 aaKnown RBP17.24■□□□□ 0.35
LRFN3-201ENST00000246529 EIF2B4Q9UI10 523 aaKnown RBP17.24■□□□□ 0.35
LRFN3-201ENST00000246529 SCN5AQ14524 2016 aa17.24■□□□□ 0.35
LRFN3-201ENST00000246529 ZNF839A8K0R7 811 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 NME4O00746 187 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 DENRO43583 198 aaKnown RBP17.23■□□□□ 0.35
LRFN3-201ENST00000246529 LBPP18428 481 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 RBBP7Q16576 425 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 C18orf21Q32NC0 220 aaPredicted RBP17.23■□□□□ 0.35
LRFN3-201ENST00000246529 SAMD4BQ5PRF9 694 aaKnown RBP17.23■□□□□ 0.35
LRFN3-201ENST00000246529 AMIGO2Q86SJ2 522 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 ZNF461Q8TAF7 563 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 OVCA2Q8WZ82 227 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 IGSF21Q96ID5 467 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 TRAPPC9Q96Q05 1148 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 CDK15Q96Q40 435 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 TM6SF2Q9BZW4 377 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 PCTPQ9UKL6 214 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 PGM3O95394 542 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 PYGLP06737 847 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 MBL2P11226 248 aaPredicted RBP17.23■□□□□ 0.35
LRFN3-201ENST00000246529 ATP6V1B2P21281 511 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 CA5AP35218 305 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 POLE2P56282 527 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 SMAD3P84022 425 aaKnown RBP17.23■□□□□ 0.35
LRFN3-201ENST00000246529 RPS6KA2Q15349 733 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 LIN52Q52LA3 116 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 NAIF1Q69YI7 327 aaPredicted RBP17.23■□□□□ 0.35
LRFN3-201ENST00000246529 HERC6Q8IVU3 1022 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 MARVELD2Q8N4S9 558 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 NKAPQ8N5F7 415 aaKnown RBP17.23■□□□□ 0.35
LRFN3-201ENST00000246529 EME1Q96AY2 570 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 PLEKHG4BQ96PX9 1271 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 HGH1Q9BTY7 390 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 APPL1Q9UKG1 709 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 SNX13Q9Y5W8 968 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 BACE2Q9Y5Z0 518 aa17.23■□□□□ 0.35
LRFN3-201ENST00000246529 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 PIM1P11309 404 aaPredicted RBP17.22■□□□□ 0.35
LRFN3-201ENST00000246529 TTPAP49638 278 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 RHOAP61586 193 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 MTX3Q5HYI7 312 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 FAM117BQ6P1L5 589 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 LYSMD3Q7Z3D4 306 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 TMEM150AQ86TG1 271 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 SPDYE1Q8NFV5 336 aaPredicted RBP17.22■□□□□ 0.35
LRFN3-201ENST00000246529 VPS33AQ96AX1 596 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 ZFRQ96KR1 1074 aaKnown RBP17.22■□□□□ 0.35
LRFN3-201ENST00000246529 CD274Q9NZQ7 290 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 EGFL7Q9UHF1 273 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 TCRBV3S1A0A5B6 114 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 SYCE1LA8MT33 242 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 E5RI56 91 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 ANGPT2O15123 496 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 PSMA3P25788 255 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 GKP32189 559 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 SOX11P35716 441 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 CSKP41240 450 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 IL2P60568 153 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 SPOUT1Q5T280 376 aaKnown RBP17.22■□□□□ 0.35
LRFN3-201ENST00000246529 HACD2Q6Y1H2 254 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 GPSM1Q86YR5 675 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 TMEM126BQ8IUX1 230 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 PCYOX1LQ8NBM8 494 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 OR2T11Q8NH01 316 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 ZNF483Q8TF39 744 aaPredicted RBP17.22■□□□□ 0.35
LRFN3-201ENST00000246529 GPATCH1Q9BRR8 931 aaKnown RBP17.22■□□□□ 0.35
LRFN3-201ENST00000246529 FEM1AQ9BSK4 669 aa17.22■□□□□ 0.35
LRFN3-201ENST00000246529 C1orf50Q9BV19 199 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms