RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PHYKPLQ8IUZ5 450 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 TWIST2Q8WVJ9 160 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 EFHD1Q9BUP0 239 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 THEGQ9P2T0 379 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 ANAPC1Q9H1A4 1944 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 ARHGAP10A1A4S6 786 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 E7ENX8 843 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 PDLIM1O00151 329 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 FKTNO75072 461 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 ECI2O75521 394 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 STAMBPO95630 424 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 TSPAN12O95859 305 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 RPS17P08708 135 aaKnown RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 PKMP14618 531 aaKnown RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 GPX3P22352 226 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 MC4RP32245 332 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 CLCN4P51793 760 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 NAA20P61599 178 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 LCP2Q13094 533 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 VEPH1Q14D04 833 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 TAF12Q16514 161 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 SAMD4BQ5PRF9 694 aaKnown RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 RBM44Q6ZP01 1051 aaKnown RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 FBXO39Q8N4B4 442 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 PCDH20Q8N6Y1 951 aaKnown RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 FUBP1Q96AE4 644 aaKnown RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 FBRSL1Q9HCM7 1045 aaKnown RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 OR51B4Q9Y5P0 310 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 ATP6AP2A0A1C7CYW4 349 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 SYCE1LA8MT33 242 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 SUPT3HB4E1H0 165 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 STX16O14662 325 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 PFDN6O15212 129 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 FZD6O60353 706 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 SUPT3HO75486 399 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 ATP6AP2O75787 350 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 ZNF26P17031 533 aaPredicted RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 PSMC3P17980 439 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 TCN1P20061 433 aaPredicted RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 TSNQ15631 228 aaKnown RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 CTSL3PQ5NE16 218 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 C6orf52Q5T4I8 152 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 IL23RQ5VWK5 629 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 LINGO4Q6UY18 593 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 ANKRD33Q7Z3H0 272 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 GALNT4Q8N4A0 578 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 PBXIP1Q96AQ6 731 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 ZNF597Q96LX8 424 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 HERC2P3Q9BVR0 1158 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 OSBPL11Q9BXB4 747 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 KLHL33A6NCF5 533 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 PIP5K1BO14986 540 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 GREM1O60565 184 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 VPS26AO75436 327 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 OR6B1O95007 311 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 HDCP19113 662 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 MZF1P28698 734 aaPredicted RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 EEF1DP29692 281 aaKnown RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 SLC7A1P30825 629 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 NR1H2P55055 460 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 ADARP55265 1226 aaKnown RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 FOXA1P55317 472 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 STX1BP61266 288 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 CDKL1Q00532 357 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 CLCQ05315 142 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 NADK2Q4G0N4 442 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 DEFB128Q7Z7B8 93 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 FUNDC1Q8IVP5 155 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 ATP6V1E2Q96A05 226 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 UHRF1Q96T88 793 aaPredicted RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 SLC30A3Q99726 388 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 PAK6Q9NQU5 681 aaPredicted RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 DNMT3BQ9UBC3 853 aaKnown RBP21.75■■□□□ 1.07
RNF39-201ENST00000244360 GALPQ9UBC7 116 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 APPL1Q9UKG1 709 aa21.75■■□□□ 1.07
RNF39-201ENST00000244360 TCRBV3S1A0A5B6 114 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 CDC7O00311 574 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 MRASO14807 208 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 VILLO15195 856 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 STX7O15400 261 aaKnown RBP21.74■■□□□ 1.07
RNF39-201ENST00000244360 NRP2O60462 931 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 TBL1XO60907 577 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 MT-CO1P00395 513 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 ATXN3P54252 364 aaPredicted RBP21.74■■□□□ 1.07
RNF39-201ENST00000244360 RAB33AQ14088 237 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 AARS2Q5JTZ9 985 aaKnown RBP21.74■■□□□ 1.07
RNF39-201ENST00000244360 EFHBQ8N7U6 833 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 HJURPQ8NCD3 748 aaPredicted RBP21.74■■□□□ 1.07
RNF39-201ENST00000244360 FAM156AQ8NDB6 213 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 OR9I1Q8NGQ6 314 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 TRPC4APQ8TEL6 797 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 ZNF296Q8WUU4 475 aaPredicted RBP21.74■■□□□ 1.07
RNF39-201ENST00000244360 ROPN1LQ96C74 230 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 NMD3Q96D46 503 aaKnown RBP21.74■■□□□ 1.07
RNF39-201ENST00000244360 PRPF18Q99633 342 aaKnown RBP21.74■■□□□ 1.07
RNF39-201ENST00000244360 FEM1AQ9BSK4 669 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 HAUS8Q9BT25 410 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 TUBB1Q9H4B7 451 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 CD300AQ9UGN4 299 aa21.74■■□□□ 1.07
RNF39-201ENST00000244360 CROTQ9UKG9 612 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 332.5 ms