RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SPHK2Q9NRA0 654 aa18.35■□□□□ 0.53
HOXC11-201ENST00000243082 SOBPA7XYQ1 873 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 SUPT3HB4E1H0 165 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 C5orf67F2Z3F1 127 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 SUPT3HO75486 399 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 CDK14O94921 469 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 PABPC1P11940 636 aaKnown RBP18.34■□□□□ 0.53
HOXC11-201ENST00000243082 ARSAP15289 507 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 BPIP17213 487 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 IL2P60568 153 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 ACCSLQ4AC99 568 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 SWT1Q5T5J6 900 aaKnown RBP18.34■□□□□ 0.53
HOXC11-201ENST00000243082 ICE2Q659A1 982 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 CHSY3Q70JA7 882 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 SNX20Q7Z614 316 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 TSPAN33Q86UF1 283 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 RP9Q8TA86 221 aaKnown RBP18.34■□□□□ 0.53
HOXC11-201ENST00000243082 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.34■□□□□ 0.53
HOXC11-201ENST00000243082 NSUN5Q96P11 429 aaKnown RBP18.34■□□□□ 0.53
HOXC11-201ENST00000243082 TUBGCP5Q96RT8 1024 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 ZBTB26Q9HCK0 441 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 SLCO3A1Q9UIG8 710 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 RWDD3Q9Y3V2 267 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 PDE4DIPQ5VU43 2346 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 LAMA3Q16787 3333 aa18.34■□□□□ 0.53
HOXC11-201ENST00000243082 NPIPB15A6NHN6 443 aaPredicted RBP18.33■□□□□ 0.53
HOXC11-201ENST00000243082 A8MX80 341 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 E5RI56 91 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 BTN3A1O00481 513 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 BNIP3LO60238 219 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 KLK8O60259 260 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 HNRNPA1P09651 372 aaKnown RBP eCLIP18.33■□□□□ 0.53
HOXC11-201ENST00000243082 TYRP14679 529 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 EZRP15311 586 aaKnown RBP18.33■□□□□ 0.53
HOXC11-201ENST00000243082 NFATC2Q13469 925 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 PGM2L1Q6PCE3 622 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 SNX32Q86XE0 403 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 CPNE9Q8IYJ1 553 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 KIRREL3Q8IZU9 778 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 FBXO39Q8N4B4 442 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 LINGO1Q96FE5 620 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 ASB2Q96Q27 587 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 PANX3Q96QZ0 392 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 BOCQ9BWV1 1114 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 SUV39H2Q9H5I1 410 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 ASB8Q9H765 288 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 SLC25A13Q9UJS0 675 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 APPL1Q9UKG1 709 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 PPIL1Q9Y3C6 166 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 PCDHB1Q9Y5F3 818 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 SCN8AQ9UQD0 1980 aa18.33■□□□□ 0.53
HOXC11-201ENST00000243082 TRBV5-4A0A0C4DH59 114 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 SYCE1LA8MT33 242 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 KRT36O76013 467 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 FGF4P08620 206 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 MYOGP15173 224 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 EEF1DP29692 281 aaKnown RBP18.33■□□□□ 0.52
HOXC11-201ENST00000243082 CCNHP51946 323 aaPredicted RBP18.33■□□□□ 0.52
HOXC11-201ENST00000243082 TRMT5Q32P41 509 aaKnown RBP18.33■□□□□ 0.52
HOXC11-201ENST00000243082 CARD16Q5EG05 197 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 LY6G5CQ5SRR4 150 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 ZNF697Q5TEC3 545 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 CRTC1Q6UUV9 634 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 DPY19L3Q6ZPD9 716 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 GRASPQ7Z6J2 395 aaPredicted RBP18.33■□□□□ 0.52
HOXC11-201ENST00000243082 ADIPOR2Q86V24 386 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 DEFB107AQ8IZN7 70 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 ADGRG2Q8IZP9 1017 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 CLYBLQ8N0X4 340 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 CBARPQ8N350 705 aaPredicted RBP18.33■□□□□ 0.52
HOXC11-201ENST00000243082 LEMD2Q8NC56 503 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 SCRN2Q96FV2 425 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 CPEB1Q9BZB8 566 aaKnown RBP18.33■□□□□ 0.52
HOXC11-201ENST00000243082 CEP44Q9C0F1 390 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 SARS2Q9NP81 518 aaKnown RBP18.33■□□□□ 0.52
HOXC11-201ENST00000243082 TBC1D14Q9P2M4 693 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 DHRS7Q9Y394 339 aa18.33■□□□□ 0.52
HOXC11-201ENST00000243082 CHD9Q3L8U1 2897 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 XYLBO75191 536 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 CIB2O75838 187 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 PSMG1O95456 288 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 SYN1P17600 705 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 UGT1A6P19224 532 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 UGT1A1P22309 533 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 UGT1A4P22310 534 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 RPS3P23396 243 aaKnown RBP eCLIP18.32■□□□□ 0.52
HOXC11-201ENST00000243082 UGT1A3P35503 534 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 UGT1A5P35504 534 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 HK3P52790 923 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 ECT2LQ008S8 904 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 SEMG2Q02383 582 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 CYLC2Q14093 348 aaPredicted RBP18.32■□□□□ 0.52
HOXC11-201ENST00000243082 HERC3Q15034 1050 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 PPP1R3AQ16821 1122 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 EML3Q32P44 896 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 UGT3A1Q6NUS8 523 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 RIPOR1Q6ZS17 1223 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 C7orf61Q8IZ16 206 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 PCDH20Q8N6Y1 951 aaKnown RBP18.32■□□□□ 0.52
HOXC11-201ENST00000243082 NAT14Q8WUY8 206 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms