RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 RNF10Q8N5U6 811 aaKnown RBP13.69□□□□□ -0.22
DDX39A-201ENST00000242776 DPYSL5Q9BPU6 564 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 LZTFL1Q9NQ48 299 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 PCSK1NQ9UHG2 260 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 IP6K2Q9UHH9 426 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 GUCA1BQ9UMX6 200 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 TFR2Q9UP52 801 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 AP4E1Q9UPM8 1137 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 SLC17A4Q9Y2C5 497 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 CREBBPQ92793 2442 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 MACROD2A1Z1Q3 448 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 CDC14CA4D256 554 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 TMEM191CA6NGB0 347 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 NPIPB15A6NHN6 443 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-201ENST00000242776 TTLL8A6PVC2 850 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 MKRN2OSH3BPM6 223 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 POLR1CO15160 346 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-201ENST00000242776 SNX2O60749 519 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 IVLP07476 585 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 RNF224P0DH78 156 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 PSMA2P25787 234 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 STAT5AP42229 794 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 CD97P48960 835 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-201ENST00000242776 MAXP61244 160 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 OGDHQ02218 1023 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 HHEXQ03014 270 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 SLC10A7Q0GE19 358 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 SQSTM1Q13501 440 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 PIGHQ14442 188 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-201ENST00000242776 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
DDX39A-201ENST00000242776 FHL5Q5TD97 284 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 ARHGAP12Q8IWW6 846 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 NPWQ8N729 165 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 EFCAB3Q8N7B9 438 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 ALS2CR12Q96Q35 445 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 KCTD15Q96SI1 283 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-201ENST00000242776 ULBP3Q9BZM4 244 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 PRDM8Q9NQV8 689 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 KCND1Q9NSA2 647 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 ZNHIT2Q9UHR6 403 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 CROTQ9UKG9 612 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 PCDHB3Q9Y5E6 796 aa13.68□□□□□ -0.22
DDX39A-201ENST00000242776 PCYT1BQ9Y5K3 369 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-201ENST00000242776 RP1L1Q8IWN7 2480 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-201ENST00000242776 DNAJB5O75953 348 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 RNF8O76064 485 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 PDGFAP04085 211 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 CYP2A6P11509 494 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ERCC2P18074 760 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 COL8A1P27658 744 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 MAN1A1P33908 653 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 AP1S1P61966 158 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 TRAF2Q12933 501 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 PEX6Q13608 980 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ZNF235Q14590 738 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 PYCR3Q53H96 274 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 PPP6R3Q5H9R7 873 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 CHST15Q7LFX5 561 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ARHGAP22Q7Z5H3 698 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 GALNT13Q8IUC8 556 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 CCDC13Q8IYE1 715 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 SYCE1Q8N0S2 351 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ESX1Q8N693 406 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 GALNT6Q8NCL4 622 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 SCAMP4Q969E2 229 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 AGAP2Q99490 1192 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 CNPY3Q9BT09 278 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 TBC1D10AQ9BXI6 508 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ABCG8Q9H221 673 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 TRMT1Q9NXH9 659 aaKnown RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 TLK1Q9UKI8 766 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 KCNK6Q9Y257 313 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 TMEM184BQ9Y519 407 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 SEMA7AO75326 666 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 DLGAP3O95886 979 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ATP1A1P05023 1023 aaKnown RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 SEPHS1P49903 392 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 IL10RBQ08334 325 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 NSUN2Q08J23 767 aaKnown RBP eCLIP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ESPL1Q14674 2120 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 MESDQ14696 234 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 CAPRIN2Q6IMN6 1127 aaKnown RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 C11orf63Q6NUN7 778 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 REXO1L1PQ8IX06 675 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 PGBD5Q8N414 524 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 SFRP1Q8N474 314 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 NIPA2Q8N8Q9 360 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 AP2M1Q96CW1 435 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 ZPBPQ9BS86 351 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 SNRNP25Q9BV90 132 aaKnown RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 TRIT1Q9H3H1 467 aaKnown RBP13.67□□□□□ -0.22
DDX39A-201ENST00000242776 NOD2Q9HC29 1040 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 FBXO8Q9NRD0 319 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 TRIM10Q9UDY6 481 aa13.67□□□□□ -0.22
DDX39A-201ENST00000242776 DUSP10Q9Y6W6 482 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms