RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 WDR59Q6PJI9 974 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 KANSL1Q7Z3B3 1105 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 KCNMB4Q86W47 210 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 KAT2AQ92830 837 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 RCN3Q96D15 328 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 PTBP2Q9UKA9 531 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 CRB1P82279 1406 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 AIREO43918 545 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 SHBGP04278 402 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 ALADP13716 330 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 TSPAN8P19075 237 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 GNPDA1P46926 289 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 CD151P48509 253 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 PTENP60484 403 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 CNTN2Q02246 1040 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 HSD17B12Q53GQ0 312 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 MARC1Q5VT66 337 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 COQ8AQ8NI60 647 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 SEC14L1Q92503 715 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 TMCO6Q96DC7 493 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 SMARCD1Q96GM5 515 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 ZFP3Q96NJ6 502 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 ZNF700Q9H0M5 742 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 NMRAL1Q9HBL8 299 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 ZNF639Q9UID6 485 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 ATP5C1P36542 298 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 CTSKP43235 329 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 EPHA10Q5JZY3 1008 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 GMCL1P1Q8NEA9 526 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 CEP76Q8TAP6 659 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 SYN2Q92777 582 aaPredicted RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 COPS5Q92905 334 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 CAPNS2Q96L46 248 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 MBOAT7Q96N66 472 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 MRPL9Q9BYD2 267 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 CDH19Q9H159 772 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 SEMA4BQ9NPR2 832 aaPredicted RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 FBXO6Q9NRD1 293 aaPredicted RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 SNTG1Q9NSN8 517 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 DRG1Q9Y295 367 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 RBM47A0AV96 593 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 TTC34A8MYJ7 566 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 KHNYNO15037 678 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 STATHP02808 62 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 GNA12Q03113 381 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 DUSP4Q13115 394 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 NAB1Q13506 487 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 PITRM1Q5JRX3 1037 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 AENQ8WTP8 325 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 CIDECQ96AQ7 238 aaPredicted RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 ASF1AQ9Y294 204 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 IQCF5A8MTL0 148 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 SMAD9O15198 467 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 VAPBO95292 243 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 PGLSO95336 258 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 RRM1P23921 792 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 MGAT1P26572 445 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 TAS2R41P59536 307 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 BOLA3Q53S33 107 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 C1orf94Q6P1W5 598 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 FOXRED2Q8IWF2 684 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 PIWIL2Q8TC59 973 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 APBB2Q92870 758 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 CRAMP1Q96RY5 1269 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 ZNF446Q9NWS9 450 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 PTTG2Q9NZH5 202 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 HCN2Q9UL51 889 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 CDK7P50613 346 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 P2RY8Q86VZ1 359 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 TMIEQ8NEW7 156 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 WDR6Q9NNW5 1121 aaKnown RBP11.05□□□□□ -0.64
MSH6-201ENST00000234420 COPS7AQ9UBW8 275 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 SDK1Q7Z5N4 2213 aa11.05□□□□□ -0.64
MSH6-201ENST00000234420 FAM205CA6NFA0 338 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 PEX11AO75192 247 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 CLEC3AO75596 197 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 TXNL4AP83876 142 aaKnown RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 HERC3Q15034 1050 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 FBXO47Q5MNV8 452 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 AHSA2Q719I0 299 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 OR2L2Q8NH16 312 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 TRMT10AQ8TBZ6 339 aaKnown RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 ZNF431Q8TF32 576 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 ZFP14Q9HCL3 533 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 TMEM8AQ9HCN3 771 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 GPR108Q9NPR9 543 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 C12orf71A8MTZ7 269 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 PRKACBP22694 351 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 PRKAA2P54646 552 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 WSCD2Q2TBF2 565 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 FRMD8P1Q9BZ68 369 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
MSH6-201ENST00000234420 POLLQ9UGP5 575 aa11.04□□□□□ -0.64
MSH6-201ENST00000234420 HSPB11Q9Y547 144 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms