RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 SPATA6LQ8N4H0 392 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 FIBINQ8TAL6 211 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 ABCG8Q9H221 673 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 COG4Q9H9E3 785 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 FAM8A1Q9UBU6 413 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 PKP3Q9Y446 797 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 MYO16Q9Y6X6 1858 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 TSC2P49815 1807 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 TMX2-CTNND1H3BSU7 103 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 LATS1O95835 1130 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 FGF1P05230 155 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 FAM58BPP0C7Q3 252 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 DCTN2Q13561 401 aaKnown RBP11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 FAM219BQ5XKK7 198 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 KRT80Q6KB66 452 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 KLHL35Q6PF15 583 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 KYAT3Q6YP21 454 aaKnown RBP11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 LPCAT2Q7L5N7 544 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 VN1R2Q8NFZ6 395 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 GANCQ8TET4 914 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 RCN3Q96D15 328 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 PKP2Q99959 881 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 BRD9Q9H8M2 597 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 C1orf232A0A0U1RR37 186 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 H3BNX3 289 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 NFATC1O95644 943 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 RALBP11234 206 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 AOC1P19801 751 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 SERPINA4P29622 427 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 SERPINB8P50452 374 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 SERPINB9P50453 376 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 NAA20P61599 178 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 CBX3Q13185 183 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 GEN1Q17RS7 908 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 SERPINA13PQ6UXR4 307 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 PCDH20Q8N6Y1 951 aaKnown RBP11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 EXT2Q93063 718 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 NUF2Q9BZD4 464 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 ATP13A3Q9H7F0 1226 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 INTS6Q9UL03 887 aaKnown RBP11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 GLP2RO95838 553 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 IMPDH2P12268 514 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 HLA-EP13747 358 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 DLX2Q07687 328 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 HYAL1Q12794 435 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 ANKDD1AQ495B1 522 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 TMEM259Q4ZIN3 620 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 MAPK15Q8TD08 544 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 SGF29Q96ES7 293 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 LRRC3BQ96PB8 259 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 SLC30A1Q9Y6M5 507 aa11.65□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZNF638Q14966 1978 aaKnown RBP11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 PRR23AA6NEV1 266 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 TPST1O60507 370 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 TULP3O75386 442 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 NDUFS3O75489 264 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 ENTPD1P49961 510 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 ART3Q13508 389 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 RFTN1Q14699 578 aaPredicted RBP11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 KDELC1Q6UW63 502 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 GAB3Q8WWW8 586 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 ACE2Q9BYF1 805 aaPredicted RBP11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 FBXO5Q9UKT4 447 aa11.65□□□□□ -0.55
TNFAIP1-201ENST00000226225 SZT2Q5T011 3432 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 ARHGAP10A1A4S6 786 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 AURKAO14965 403 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 CHRNGP07510 517 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 KCNA5P22460 613 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 TRAF2Q12933 501 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 SLC44A4Q53GD3 710 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 DPY19L3Q6ZPD9 716 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 CPXM2Q8N436 756 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 DCLK2Q8N568 766 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 OR2AP1Q8NGE2 309 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 MYO19Q96H55 970 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 VPS39Q96JC1 886 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 NPAS2Q99743 824 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 LMAN2LQ9H0V9 348 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 PCDHAC1Q9H158 963 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 DZANK1Q9NVP4 752 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 SNX13Q9Y5W8 968 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 ANKRD66B4E2M5 251 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 CCNT2O60583 730 aaKnown RBP11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 TNFAIP8O95379 198 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 PENKP01210 267 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 TSHRP16473 764 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 SLC6A11P48066 632 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 MS4A2Q01362 244 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 KLF10Q13118 480 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 ATP1A4Q13733 1029 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 FUT11Q495W5 492 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 TSTD2Q5T7W7 516 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 DENND5AQ6IQ26 1287 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 ACTRT2Q8TDY3 377 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 ATP6V1E2Q96A05 226 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 CPNE1Q99829 537 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 MGME1Q9BQP7 344 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 ARMC7Q9H6L4 198 aa11.64□□□□□ -0.55
TNFAIP1-201ENST00000226225 PLAC1Q9HBJ0 212 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms