RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 HS3ST3A1Q9Y663 406 aa13.93□□□□□ -0.18
SEC61B-201ENST00000223641 A0A1W2PPC4 97 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 SLC31A1O15431 190 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 NDUFS2O75306 463 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 SASH3O75995 380 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 HAUS5O94927 633 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 HOXC4P09017 264 aaPredicted RBP13.92□□□□□ -0.18
SEC61B-201ENST00000223641 BCKDHBP21953 392 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 IGFALSP35858 605 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 PPARGP37231 505 aaPredicted RBP13.92□□□□□ -0.18
SEC61B-201ENST00000223641 GP5P40197 560 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 PTGER3P43115 390 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 GPR1P46091 355 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 MPP1Q00013 466 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 ZNF844Q08AG5 666 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 ILF2Q12905 390 aaKnown RBP13.92□□□□□ -0.18
SEC61B-201ENST00000223641 DBN1Q16643 649 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 ZNF789Q5FWF6 425 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 GPRC6AQ5T6X5 926 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 RNF187Q5TA31 235 aaPredicted RBP13.92□□□□□ -0.18
SEC61B-201ENST00000223641 GRTP1Q5TC63 336 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 RAET1GQ6H3X3 334 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 PACS1Q6VY07 963 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 STRA8Q7Z7C7 330 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 LDB1Q86U70 411 aaPredicted RBP13.92□□□□□ -0.18
SEC61B-201ENST00000223641 CNPY4Q8N129 248 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 ZBTB44Q8NCP5 570 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 GAB3Q8WWW8 586 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 LPGAT1Q92604 370 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 BMFQ96LC9 184 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 RBBP8Q99708 897 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 P2RY12Q9H244 342 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 CRLS1Q9UJA2 301 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 INVSQ9Y283 1065 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 VPS9D1Q9Y2B5 631 aa13.92□□□□□ -0.18
SEC61B-201ENST00000223641 ABCA7Q8IZY2 2146 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 HMX2A2RU54 273 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 POC1B-GALNT4F8VUJ3 575 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 PRAMEF26H0Y7S4 382 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 AGPSO00116 658 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 TOR1BO14657 336 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 PFDN6O15212 129 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 ATP8B1O43520 1251 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 FAM155BO75949 473 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 FSBPO95073 299 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 IVLP07476 585 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 CNR2P34972 360 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 MSH2P43246 934 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 PFN3P60673 137 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 B4GALNT1Q00973 533 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 RPL6Q02878 288 aaKnown RBP13.91□□□□□ -0.18
SEC61B-201ENST00000223641 INPP5AQ14642 412 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 LDLRAP1Q5SW96 308 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 CNSTQ6PJW8 725 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 TAS2R42Q7RTR8 314 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 ABI3BPQ7Z7G0 1075 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 C11orf74Q86VG3 221 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 ZC3HC1Q86WB0 502 aaKnown RBP13.91□□□□□ -0.18
SEC61B-201ENST00000223641 SLC41A1Q8IVJ1 513 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 RIBC1Q8N443 379 aaPredicted RBP13.91□□□□□ -0.18
SEC61B-201ENST00000223641 DNASE2BQ8WZ79 361 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 FOXJ1Q92949 421 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 HIC2Q96JB3 615 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 TTC1Q99614 292 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 RHOJQ9H4E5 214 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 FZD3Q9NPG1 666 aa13.91□□□□□ -0.18
SEC61B-201ENST00000223641 FBXO6Q9NRD1 293 aaPredicted RBP13.91□□□□□ -0.18
SEC61B-201ENST00000223641 CORO1CQ9ULV4 474 aaPredicted RBP13.91□□□□□ -0.18
SEC61B-201ENST00000223641 TNRC6BQ9UPQ9 1833 aaKnown RBP13.91□□□□□ -0.18
SEC61B-201ENST00000223641 FAM86C2PA6NEL3 165 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 POM121BA6NF01 834 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 FPGTO14772 594 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 RASGRF2O14827 1237 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 CDH16O75309 829 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 NDUFS3O75489 264 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 SLC25A14O95258 325 aaPredicted RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 PCCBP05166 539 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 INHBAP08476 426 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 SP9P0CG40 484 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 ZNF7P17097 686 aaPredicted RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 RPS3P23396 243 aaKnown RBP eCLIP13.9□□□□□ -0.184e-7■■■■■ 29.3
SEC61B-201ENST00000223641 CNTFP26441 200 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 CD27P26842 260 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 PMLP29590 882 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 AKT2P31751 481 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 SPRP35270 261 aaPredicted RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 NSG1P42857 185 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 CD151P48509 253 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 SERPINB9P50453 376 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 LIMK2P53671 638 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 YPEL5P62699 121 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 CDK3Q00526 305 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 IFFO1Q0D2I5 559 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 ANGPT1Q15389 498 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 KHDC1Q4VXA5 237 aaKnown RBP13.9□□□□□ -0.18
SEC61B-201ENST00000223641 GCNT7Q6ZNI0 430 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 CROCCP2Q86T23 111 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 HEATR4Q86WZ0 1026 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 PHYKPLQ8IUZ5 450 aa13.9□□□□□ -0.18
SEC61B-201ENST00000223641 RBFAQ8N0V3 343 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms