RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 NTRK1P04629 796 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 ATXN8OSP0DMR3 200 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 YWHAQP27348 245 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 GPD2P43304 727 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 KPNA1P52294 538 aaPredicted RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 MADCAM1Q13477 382 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 UGT2A3Q6UWM9 527 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 SLC39A5Q6ZMH5 540 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 UNC93AQ86WB7 457 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 REXO5Q96IC2 774 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 DMRTB1Q96MA1 342 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 MUC3BQ9H195 1237 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 KRT84Q9NSB2 600 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 FAIMQ9NVQ4 179 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 SUCOQ9UBS9 1254 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 MFHAS1Q9Y4C4 1052 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 PMF1-BGLAPU3KQ54 211 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 KRT6AP02538 564 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 KRT6BP04259 564 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 PTPN1P18031 435 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 KRT20P35900 424 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 SLC26A3P40879 764 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 KRT6CP48668 564 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 CCT3P49368 545 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 WNT3AP56704 352 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 EFEMP1Q12805 493 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 TRAP1Q12931 704 aaKnown RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 SPDYE7PQ495Y7 208 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 STRADAQ7RTN6 431 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 ST13P5Q8NFI4 369 aaPredicted RBP11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 MCOLN3Q8TDD5 553 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 RSPH1Q8WYR4 309 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 TWNKQ96RR1 684 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 DYRK4Q9NR20 520 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 SPATA2Q9UM82 520 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 NENFQ9UMX5 172 aa11.48□□□□□ -0.57
DNMT3B-201ENST00000201963 PIPSLA2A3N6 862 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 H3BNH8 94 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 DLX3O60479 287 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 TMCC2O75069 709 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 SH3BGRLO75368 114 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 CLPXO76031 633 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 MT-CYBP00156 380 aaPredicted RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 F2P00734 622 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 ABCB1P08183 1280 aaPredicted RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 CNPP09543 421 aaKnown RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 NPR3P17342 541 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 AZGP1P25311 298 aaKnown RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 HERC3Q15034 1050 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 PSMD5Q16401 504 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF57Q68EA5 555 aaPredicted RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 NIPAL1Q6NVV3 410 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 AHSA2Q719I0 299 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 ZC3H7AQ8IWR0 971 aaKnown RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 TMEM132CQ8N3T6 1108 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 LZTR1Q8N653 840 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 TRPV1Q8NER1 839 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 MTFMTQ96DP5 389 aaKnown RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 FTHL17Q9BXU8 183 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 RAPGEFL1Q9UHV5 662 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 IKZF3Q9UKT9 509 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 TMCC3Q9ULS5 477 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 AQP12BA6NM10 295 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 BCKDKO14874 412 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 SLC22A2O15244 555 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 CKBP12277 381 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 RABGGTBP53611 331 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 RFX4Q33E94 735 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 SLC25A52Q3SY17 297 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 SLC24A5Q71RS6 500 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 RPS27LQ71UM5 84 aaKnown RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 PROSER1Q86XN7 944 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 KRT73Q86Y46 540 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 AQP12AQ8IXF9 295 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 FAM45AQ8TCE6 357 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 GAB3Q8WWW8 586 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 ROPN1LQ96C74 230 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 PRDM16Q9HAZ2 1276 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 KANSL3Q9P2N6 904 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 TMED5Q9Y3A6 229 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 MYO18AQ92614 2054 aaKnown RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 MYH4Q9Y623 1939 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 PTPRJQ12913 1337 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 CYP7B1O75881 506 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 DHRS4L1P0CG22 281 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 ERMP1Q7Z2K6 904 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 HS6ST3Q8IZP7 471 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 GANCQ8TET4 914 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 HAPLN3Q96S86 360 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 ABCG8Q9H221 673 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
DNMT3B-201ENST00000201963 PIP5K1BO14986 540 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 DHX15O43143 795 aaKnown RBP11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 RGS10O43665 173 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 TSPAN9O75954 239 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 CKMP06732 381 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms