RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 NXNL1Q96CM4 212 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 HLA-DQA2P01906 255 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 TIGD5Q53EQ6 642 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 ZNF248Q8NDW4 579 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 ZNF599Q96NL3 588 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 CDH5P33151 784 aaPredicted RBP23.04■■□□□ 1.28
TARBP1-201ENST00000040877 DGKGP49619 791 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 SEMA5AQ13591 1074 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 TOMM20Q15388 145 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 ZNF618Q5T7W0 954 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 MZT2AQ6P582 158 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 TMEM175Q9BSA9 504 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 SPRTNQ9H040 489 aaPredicted RBP23.04■■□□□ 1.28
TARBP1-201ENST00000040877 SIGLEC1Q9BZZ2 1709 aa23.04■■□□□ 1.28
TARBP1-201ENST00000040877 YJEFN3A6XGL0 299 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 ARVCFO00192 962 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 ADSLP30566 484 aaPredicted RBP23.03■■□□□ 1.28
TARBP1-201ENST00000040877 CSNK2BP67870 215 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 TAF1AQ15573 450 aaPredicted RBP23.03■■□□□ 1.28
TARBP1-201ENST00000040877 SOWAHAQ2M3V2 549 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 DAW1Q8N136 415 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 ACAT2Q9BWD1 397 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 IRAK2O43187 625 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 CD48P09326 243 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 RPIAP49247 311 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 SPIRE1Q08AE8 756 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 KLF10Q13118 480 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 NR1D2Q14995 579 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 SF1Q15637 639 aaKnown RBP23.03■■□□□ 1.28
TARBP1-201ENST00000040877 KIAA0930Q6ICG6 404 aaPredicted RBP23.03■■□□□ 1.28
TARBP1-201ENST00000040877 LINGO4Q6UY18 593 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 TMPRSS11BQ86T26 416 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 PCDH19Q8TAB3 1148 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 CLIP3Q96DZ5 547 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 PAIP1Q9H074 479 aaKnown RBP23.03■■□□□ 1.28
TARBP1-201ENST00000040877 INTS10Q9NVR2 710 aaKnown RBP23.03■■□□□ 1.28
TARBP1-201ENST00000040877 WBP4O75554 376 aaKnown RBP23.03■■□□□ 1.28
TARBP1-201ENST00000040877 ITPKAP23677 461 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 LGALS3BPQ08380 585 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 ATP1A4Q13733 1029 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 CEP68Q76N32 757 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 PYROXD2Q8N2H3 581 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 ACDQ96AP0 544 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 NMUR1Q9HB89 426 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 HMG20AQ9NP66 347 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.03■■□□□ 1.28
TARBP1-201ENST00000040877 SLC28A2O43868 658 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 MPSTP25325 297 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 ADGRG2Q8IZP9 1017 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 ERGIC3Q9Y282 383 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 DUOX1Q9NRD9 1551 aa23.03■■□□□ 1.28
TARBP1-201ENST00000040877 GABRDO14764 452 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 LRATO95237 230 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 ILF3Q12906 894 aaKnown RBP eCLIP23.02■■□□□ 1.28
TARBP1-201ENST00000040877 SULT1C3Q6IMI6 304 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 ANKS1BQ7Z6G8 1248 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 OR10H3O60404 316 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 ADARP55265 1226 aaKnown RBP23.02■■□□□ 1.28
TARBP1-201ENST00000040877 SPIBQ01892 262 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 DLG2Q15700 870 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 MFSD3Q96ES6 412 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 SUSD3Q96L08 255 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 TDRD1Q9BXT4 1180 aaKnown RBP23.02■■□□□ 1.28
TARBP1-201ENST00000040877 NUAK2Q9H093 628 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 GRIN2DO15399 1336 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 RPL4P36578 427 aaKnown RBP23.02■■□□□ 1.28
TARBP1-201ENST00000040877 APOLD1Q96LR9 279 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 FBXL18Q96ME1 805 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 MCM8Q9UJA3 840 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 DNAJA2O60884 412 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 C8GP07360 202 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 PTDSS1P48651 473 aaKnown RBP23.02■■□□□ 1.28
TARBP1-201ENST00000040877 CYP1B1Q16678 543 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 CCNYL2Q5T2Q4 361 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 SPATA22Q8NHS9 363 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 IPPKQ9H8X2 491 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 PCDHGC4Q9Y5F7 938 aa23.02■■□□□ 1.28
TARBP1-201ENST00000040877 PRR5-ARHGAP8B1AHC4 643 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 M0R2N6 131 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 ARHGAP8P85298 464 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 AMER2Q8N7J2 671 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 SMYD1Q8NB12 490 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 ZNF671Q8TAW3 534 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 PCBD2Q9H0N5 130 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 SRRDQ9UH36 339 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 UROSP10746 265 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 FECHP22830 423 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 TAB1Q15750 504 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 RNF44Q7L0R7 432 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 HEATR4Q86WZ0 1026 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 OR14C36Q8NHC7 312 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 TEX47Q8TBZ9 253 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 TWIST2Q8WVJ9 160 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 KCTD13Q8WZ19 329 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 PSMG2Q969U7 264 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 CCDC177Q9NQR7 707 aaPredicted RBP23.01■■□□□ 1.27
TARBP1-201ENST00000040877 MFN2O95140 757 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 NSG1P42857 185 aa23.01■■□□□ 1.27
TARBP1-201ENST00000040877 BPIFB6Q8NFQ5 453 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms