RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Col4a5Q63ZW6 1691 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Casz1Q9CWL2 1761 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tmem265E9Q8G3 109 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Vmn2r82G3UWA2 865 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Vmn1r170K7N6W9 304 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 CfhP06909 1234 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 ItgavP43406 1044 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Slc9a3r1P70441 355 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Nucb2P81117 420 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Yes1Q04736 541 aaKnown RBP9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Znf667Q2TL60 609 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tmem231Q3U284 315 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fam8a1Q3URQ4 399 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fam71f1Q3UZD7 341 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lrrc8bQ5DU41 803 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 UnklQ5FWH2 727 aaKnown RBP9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Uimc1Q5U5Q9 727 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tgoln1Q62313 353 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mtch2Q791V5 303 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr524Q7TRU0 318 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Asphd2Q80VP9 343 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mis18bp1Q80WQ8 998 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ckap4Q8BMK4 575 aaKnown RBP9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zfp940Q8R2Q3 566 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Plcd1Q8R3B1 756 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tbc1d22aQ8R5A6 516 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 CarfQ8VHI4 689 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Csde1Q91W50 798 aaKnown RBP9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Txndc5Q91W90 417 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Galnt11Q921L8 608 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Glipr1l2Q9CQ35 332 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Htra3Q9D236 459 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 ItpaQ9D892 198 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Slc12a4Q9JIS8 1085 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Foxo4Q9WVH3 505 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Dlg5E9Q9R9 1921 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Frmpd3A0A140LIW3 1774 aa9.02□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm30191A0A0U1RNT7 187 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cylc2B1AWN8 422 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ifi206G3UZV2 921 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Grip2G3XA20 1042 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm17026K7N6Z0 213 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn2r5K7N788 911 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm8165L7N218 213 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Mesp2O08574 370 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pbx3O35317 434 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ptpn20O55082 426 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 AdaP03958 352 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 H2-T3P14432 384 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rps6ka1P18653 724 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Glb1P23780 647 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hspa4lP48722 838 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ndst2P52850 883 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gabrb3P63080 473 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Adcy6Q01341 1165 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Drp2Q05AA6 957 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Anxa7Q07076 463 aaKnown RBP9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nr1d1Q3UV55 615 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pdp1Q3UV70 538 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Txndc16Q7TN22 820 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Camta2Q80Y50 1208 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Sap130Q8BIH0 1057 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rassf10Q8BL43 508 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tarsl2Q8BLY2 790 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Spata32Q8C5V0 334 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 RtknQ8C6B2 564 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Agbl2Q8CDK2 862 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Actl9Q8CG27 415 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kat5Q8CHK4 513 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Colec12Q8K4Q8 742 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 SuoxQ8R086 546 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tmem82Q8R115 356 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tubb6Q922F4 447 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Sntb1Q99L88 537 aaKnown RBP9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Haus5Q9D786 619 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 LrmdaQ9D9B4 229 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cnpy3Q9DAU1 276 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tceal6Q9DB24 200 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Xrn2Q9DBR1 951 aaKnown RBP9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dclre1aQ9JIC3 1026 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tgm1Q9JLF6 815 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 ArcQ9WV31 396 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rgs21V9GXQ3 152 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ssc5dQ8BV57 1371 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm29554A0A087WNW4 188 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm28919A0A087WP35 240 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Esp31A8R0W3 114 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Apol7aB2RT54 418 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Magea4F2Z493 315 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr635K7N6B1 321 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Has3O08650 554 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Slc10a1O08705 362 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 C1qbpO35658 278 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 F9P16294 471 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Irf8P23611 424 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nckap1P28660 1128 aaKnown RBP9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nkx1-2P42580 305 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Slc11a2P49282 568 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 CenpcP49452 906 aaKnown RBP9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Serpinb5P70124 375 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms