RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Pfdn6Q03958 127 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 SPINDOCQ05AH6 381 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rtl3Q6P1Y1 553 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 4921511C20RikQ8BVT7 469 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dclre1cQ8K4J0 705 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Actr8Q8R2S9 624 aaKnown RBP11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 CrebzfQ91ZR3 358 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dhrs7bQ99J47 323 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fars2Q99M01 451 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tomm70Q9CZW5 611 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 4930524N10RikQ9D519 233 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 IgtpQ9DCE9 423 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm7682A0A0J9YUM1 481 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr1123A2AT85 323 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Phf11bB4XVQ1 276 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Apol11bE9PUZ0 337 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nlrp12E9Q5R7 1054 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm17093F6XGJ4 214 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn2r55G3UWZ4 781 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm6337K7N6X9 211 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm3115L7N285 211 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Polr2jO08740 117 aaKnown RBP11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 NoctO35710 429 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Lim2P56563 173 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pdcd5P56812 126 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Treml2Q2LA85 329 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Hp1bp3Q3TEA8 554 aaKnown RBP11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Glp2rQ5IXF8 512 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dnajc1Q61712 552 aaKnown RBP11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Angptl1Q640P2 490 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Kiaa1841Q68FF0 718 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mup21Q80YX8 181 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cd209eQ91ZW7 208 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Arpc5lQ9D898 153 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rpl38Q9JJI8 70 aaKnown RBP11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mad2l1Q9Z1B5 205 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cntnap5aQ0V8T9 1304 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Arl6O88848 186 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pim1P06803 397 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 PrkcgP63318 697 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dmrtc1bQ2PMX6 267 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Hk3Q3TRM8 922 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fam35aQ3UEN2 891 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Satb1Q60611 764 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Spdye4bQ8CDE8 236 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn1r191Q8K4D0 298 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc36a1Q8K4D3 475 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Chid1Q922Q9 393 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 NckipsdQ9ESJ4 714 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rad18Q9QXK2 509 aaKnown RBP11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 PrebQ9WUQ2 417 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 TicrrQ8BQ33 1889 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ttll9A2APC3 461 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 SelenovD3YXG1 328 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Klk1b8P07628 261 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ncam1P13595 1115 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Polr2iP60898 125 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Plekha6Q7TQG1 1173 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr867Q7TRF3 331 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cpne3Q8BT60 533 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Lactb2Q99KR3 288 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nme4Q9WV84 186 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr1480A0A140LIR8 359 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 A0A1L1ST33 502 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ifi213D3Z5G0 586 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pik3cdO35904 1043 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 SgcdP82347 289 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Scn1bP97952 218 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 F8a1Q00558 380 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 OsbpQ3B7Z2 805 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mapkapk3Q3UMW7 384 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Grm5Q3UVX5 1203 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pik3r3Q64143 461 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Egfl8Q6GUQ1 293 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Thnsl2Q80W22 483 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pik3cbQ8BTI9 1064 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tprg1Q8CB49 279 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dpy30Q99LT0 99 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Itgb3bpQ9CQ82 176 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Efhd2Q9D8Y0 240 aaKnown RBP11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tex22Q9D9U4 189 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 TrmuQ9DAT5 417 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Plod2Q9R0B9 737 aa11.26□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm13040A2A8C4 496 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Faap100A2ACJ2 879 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm13101A2ASJ0 481 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm13119B1ARV5 481 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn1r76F8VQ63 324 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn2r46L7N282 809 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 H2-AaP01910 256 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc2a7P0C6A1 513 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Timm13P62075 95 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Hs3st5Q8BSL4 346 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pyhin1Q8BV49 420 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Arhgef33Q8BW86 850 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Parp9Q8CAS9 866 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Traf7Q922B6 594 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tex47Q9D5W8 253 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 CasrQ9QY96 1079 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm5485A0A1D5RM98 91 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms