RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Slc47a1Q8K0H1 567 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Nrif1Q923B3 828 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Plpp3Q99JY8 312 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 SardhQ99LB7 919 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 LmnaP48678 665 aaKnown RBP16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Ntrk1Q3UFB7 799 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Tab3Q571K4 716 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Mocs1Q5RKZ7 636 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 B3galnt2Q8BG28 504 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Zfp595Q8BIN6 625 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Upk1aQ9D132 257 aa16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Q9D937 123 aaKnown RBP16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 Vps35Q9EQH3 796 aaKnown RBP16.77■□□□□ 0.28
Sec61a1-201ENSMUST00000032168 PtprdQ64487 1912 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Klhl32A2AJX0 620 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Gbp4A4UUI3 631 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Zbed6D2EAC2 980 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Il13ra1O09030 424 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Serpinb5P70124 375 aaKnown RBP16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Gm5431Q5NCB3 844 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Slc6a3Q61327 619 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Brsk2Q69Z98 735 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 4921511C20RikQ8BVT7 469 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Gimap3Q99MI6 301 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 XpotQ9CRT8 963 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Zfp773Q9CZ29 471 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 TsaccQ9DA44 124 aa16.77■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Tmem215A7E1Z1 235 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Gp1baO35930 734 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 P01807 119 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Hoxd13P70217 339 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Sephs2P97364 452 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Q32M26 199 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Psd2Q6P1I6 770 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Prpf38bQ80SY5 542 aaKnown RBP16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Prickle2Q80Y24 845 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Cops7bQ8BV13 264 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 TpbglQ8C013 384 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Rdh13Q8CEE7 334 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 LdhcP00342 332 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Psme3P61290 254 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Itga7Q61738 1179 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Q8R1Y2 203 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Def8Q99J78 448 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Echdc3Q9D7J9 300 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Clic3Q9D7P7 237 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 PdiltQ9DAN1 588 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Ccdc97Q9DBT3 340 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Il18rapQ9Z2B1 614 aa16.76■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Vmn2r21K7N6Y7 853 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Vmn2r20L7N2B1 853 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Cldn2O88552 230 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Pacs2Q3V3Q7 862 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Zzz3Q6KAQ7 910 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Znf385bQ8BXJ8 482 aaKnown RBP16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Bmt2Q8BXK4 403 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 HnrnpllQ921F4 591 aaKnown RBP16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Tcam1Q99NB3 548 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 MydgfQ9CPT4 166 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 CtsmQ9JL96 333 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 HnrnpcQ9Z204 313 aaKnown RBP16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Fam71e2L7N480 754 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Pdha2P35487 391 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 F8a1Q00558 380 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Coq10bQ3THF9 240 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Glb1l2Q3UPY5 636 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Tmc7Q8C428 726 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Tmem259Q8CIV2 574 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 PolbQ8K409 335 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Lgals12Q91VD1 314 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Vps11Q91W86 941 aaKnown RBP16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Tnfsf13Q9D777 241 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Zfp651E9PZ11 729 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Ccl26F8VQM2 93 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Azin1O35484 448 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Btg4O70552 250 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 IkbkgO88522 412 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 CenpcP49452 906 aaKnown RBP16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Hsd17b4P51660 735 aaKnown RBP16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Ptchd3Q0EEE2 906 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Zfp560Q3URI6 754 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Gm5800Q497L3 186 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Panx3Q8CEG0 392 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Cpxm2Q9D2L5 764 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Tbc1d21Q9D9D3 336 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Aff4Q9ESC8 1160 aa16.75■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Map7d3A2AEY4 876 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Gja1P23242 382 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 CamkvQ3UHL1 512 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 MslnQ61468 625 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Lemd2Q6DVA0 511 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Fam126aQ6P9N1 521 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Ddx42Q810A7 929 aaKnown RBP16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Vps26bQ8C0E2 336 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Slc46a2Q8CA03 479 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Mab21L3Q8CI17 429 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Rbmx2Q8R0F5 326 aaKnown RBP16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Slc44a3Q921V7 656 aa16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 Prpf19Q99KP6 504 aaKnown RBP16.74■□□□□ 0.27
Sec61a1-201ENSMUST00000032168 GsdmcQ99NB5 468 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms