RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Erp27Q9D8U3 272 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Gtf2iQ9ESZ8 998 aaKnown RBP11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Khdrbs3Q9R226 346 aaKnown RBP11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Rasal1Q9Z268 799 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Nav1Q8CH77 1875 aa11.46□□□□□ -0.57
Trim55-201ENSMUST00000029139 Tnfrsf14A0A1W2P7D5 276 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Ifi213D3Z5G0 586 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Pcdh9F8VPK8 1237 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Vmn2r65G3X931 845 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Shisa8J3QNX5 399 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Gm17026K7N6Z0 213 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Rundc3aO08576 446 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Rgs5O08850 181 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Cops5O35864 334 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 DffaO54786 331 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 BpgmP15327 259 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 TfamP40630 243 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Ndst2P52850 883 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Rpl10aP53026 217 aaKnown RBP11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Pou3f4P62515 361 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Gdf9Q07105 441 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Upf3aQ3ULJ3 422 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Zfp974Q3UVF6 752 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Pla2g4fQ50L41 855 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Larp4bQ6A0A2 741 aaKnown RBP11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Stmnd1Q6P3A1 279 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Abhd10Q6PE15 297 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Dna2Q6ZQJ5 1062 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Ticam1Q80UF7 732 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Gm21627Q810R0 219 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Grik4Q8BMF5 956 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Q8CCC3 530 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Dcun1d3Q8K0V2 304 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Pitrm1Q8K411 1036 aaKnown RBP11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Prokr2Q8K458 381 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Pcdha2Q91Y17 948 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Med6Q921D4 246 aaKnown RBP11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Uck2Q99PM9 261 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Teddm3Q9CQH1 294 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Shmt2Q9CZN7 504 aaKnown RBP11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Hs6st1Q9QYK5 411 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 DnpepQ9Z2W0 473 aa11.46□□□□□ -0.58
Trim55-201ENSMUST00000029139 Gm34653A0A1L1SR01 368 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Slc37a4A0A1L1SUI3 450 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 MndalD0QMC3 538 aaKnown RBP11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Vmn2r58K7N6V2 862 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Psma3O70435 255 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Bmp8aP34821 399 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Vps4bP46467 444 aaKnown RBP11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Bmp8bP55105 399 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Plscr4P58196 326 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Psme3P61290 254 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 NfibP97863 570 aaKnown RBP11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Lpcat1Q3TFD2 534 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Zmat1Q3V0C1 714 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Ifnl2Q4VK74 193 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 IgflQ6B9Z0 140 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Enpp3Q6DYE8 874 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Zadh2Q8BGC4 377 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Mmp28Q8CGV8 520 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Col23a1Q8K4G2 532 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Gsg1Q8R1W2 324 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Tspan8Q8R3G9 235 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 NclnQ8VCM8 563 aaKnown RBP11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Acsm1Q91VA0 573 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Psat1Q99K85 370 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Mrpl54Q9CPW3 135 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Mrto4Q9D0I8 239 aaKnown RBP11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Idh3aQ9D6R2 366 aaKnown RBP11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Ptges3lQ9D9A7 131 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 ClpxQ9JHS4 634 aaKnown RBP11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Dock2Q8C3J5 1828 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Scn11aQ9R053 1765 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Zfp534A2A7A1 661 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Hbb-bh2B2RVB7 147 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Bin2D3Z6Q9 489 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Zfp988F6VKC7 633 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Spin2fJ3QPU0 254 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Ptp4a2O70274 167 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 AfmO89020 608 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 RapsnP12672 412 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Ier2P17950 221 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Gbx2P48031 348 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 St3gal1P54751 337 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Col28a1Q2UY11 1141 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Zfp987Q32P14 633 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Gpr149Q3UVY1 732 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Odr4Q4PJX1 447 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Gm13103Q4VAD2 491 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Glp2rQ5IXF8 512 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Wnt8aQ64527 354 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Krba1Q6NXZ1 1043 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Tdpoz2Q717B2 364 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Noc4lQ8BHY2 516 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Hpf1Q8CFE2 346 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Nedd4lQ8CFI0 1004 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Ppm1fQ8CGA0 452 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Syn3Q8JZP2 579 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Slc45a3Q8K0H7 553 aa11.45□□□□□ -0.58
Trim55-201ENSMUST00000029139 Trpv3Q8K424 791 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms