RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Rsrp1Q3UC65 298 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm853Q3UNZ2 425 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm136Q3V037 328 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Dna2Q6ZQJ5 1062 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zfyve1Q810J8 777 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 B3gnt5Q8BGY6 376 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Defb19Q8K3I8 83 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 FopnlQ9CZS3 174 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ift46Q9DB07 301 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Med20Q9R0X0 212 aa8.44□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ifi213D3Z5G0 586 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ddx43D3Z6P9 646 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm5152L7N200 190 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rundc3aO08576 446 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rps3P62908 243 aaKnown RBP8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 GaltQ03249 379 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Lpcat1Q3TFD2 534 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 LchnQ3UHG7 455 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Atg16l2Q6KAU8 623 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Psd2Q6P1I6 770 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nxnl1Q8VC33 217 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 DhddsQ99KU1 333 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rpl34Q9D1R9 117 aaKnown RBP8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Bpifa3Q9D9J8 232 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Trip4Q9QXN3 581 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Btnl4A2CG29 586 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fam124aD3Z5V4 536 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 AladP10518 330 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Serpind1P49182 478 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fbp2P70695 339 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 PamP97467 979 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nr1h4Q60641 488 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Klhl5Q6PFE1 708 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Epb41l5Q8BGS1 731 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ostm1Q8BGT0 338 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 PolbQ8K409 335 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pcdhga9Q91XX9 932 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Hormad1Q9D5T7 392 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Snx5Q9D8U8 404 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Trhr2Q9ERT2 382 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm21083A0A0G2JFD5 256 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc16a8O35308 492 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gpr25P0C5I1 358 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Resp18P47939 175 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Six4Q61321 775 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ca4Q64444 305 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Snx31Q6P8Y7 439 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zfp606Q7TSV0 794 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gabbr2Q80T41 940 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fam205cQ80YD3 371 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Sema3dQ8BH34 777 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pomgnt2Q8BW41 605 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rmnd5bQ91YQ7 393 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Paqr5Q9DCU0 330 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr703Q9EPF5 319 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nme7Q9QXL8 395 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Sbf2E9PXF8 1872 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zgrf1Q0VGT4 1863 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fam151bD3YUE4 279 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ephb3P54754 993 aaKnown RBP8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 BtrcQ3ULA2 605 aaKnown RBP8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mapre3Q6PER3 281 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc17a6Q8BLE7 582 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Kcns3Q8BQZ8 491 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 ThtpaQ8JZL3 224 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr606Q8VGZ8 319 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 NvlQ9DBY8 855 aaKnown RBP8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Bscl2Q9Z2E9 383 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rnf19bA2A7Q9 732 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr742A2RTP5 311 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm3642K7N6V4 267 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rhox2gL7MUB9 191 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Prox1P48437 737 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Polr3bP59470 1133 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Inppl1Q6P549 1257 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Wdr91Q7TMQ7 748 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rmdn2Q8BSE0 410 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nmur2Q8BZ39 395 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Aqp12Q8CHJ2 290 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Eml3Q8VC03 897 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 ScgnQ91WD9 276 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vsig1Q9D2J4 407 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Hmgn3Q9DCB1 99 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Smad9Q9JIW5 430 aa8.43□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 P01641 117 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pou2f3P31362 431 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rps24P62849 133 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Msx2Q03358 267 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fut7Q11131 389 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Q32P12 615 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fpr-rs6Q3SXG2 339 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ints6Q6PCM2 883 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Otub1Q7TQI3 271 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ahcyl1Q80SW1 530 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cdkn3Q810P3 211 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vps50Q8CI71 964 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 ClyblQ8R4N0 338 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ribc2Q9D4Q1 309 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Glipr1l1Q9DAG6 236 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mllt3A2AM29 569 aa8.42□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms