RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm3696K7N751 203 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Map2k3O09110 347 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Btnl2O70355 454 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Pip5k1bP70181 539 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zdhhc11Q14AK4 347 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Rbm20Q3UQS8 1199 aaKnown RBP16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Six4Q61321 775 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 MafkQ61827 156 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Thoc5Q8BKT7 683 aaKnown RBP16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tmem209Q8BRG8 561 aaKnown RBP16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ago1Q8CJG1 857 aaKnown RBP16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 C8aQ8K182 587 aa16.79■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Lcn11A2BHR2 178 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Rnf169E9Q7F2 694 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gml2G5E8L7 176 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Clcn7O70496 803 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 PargO88622 969 aaKnown RBP16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 ErfP70459 551 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tmem237Q3V0J1 427 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Pla2g4dQ50L43 825 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Serpina3aQ6P4P1 422 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Stk40Q7TNL3 435 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr1105Q7TR58 312 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 BpifcQ8C186 509 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Atoh8Q99NA2 322 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dppa5aQ9CQS7 118 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ly6kQ9CWP4 154 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ten1Q9D7K2 161 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Serpina1fQ9DCQ7 411 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ifi30Q9ESY9 248 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Il21rQ9JHX3 529 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gprc5dQ9JIL6 344 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ehd1Q9WVK4 534 aaKnown RBP16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Gm3642K7N6V4 267 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Sult3a1O35403 293 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Prom1O54990 867 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Mmp20P57748 482 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Myo1dQ5SYD0 1006 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Slain1Q68FF7 579 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Znf513Q6PD29 541 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Tas2r129Q7M709 320 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 MroQ7TNB4 248 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Lrrc8dQ8BGR2 859 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Prpf18Q8BM39 342 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Ifi44Q8BV66 422 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Rcor1Q8CFE3 480 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Cpne5Q8JZW4 593 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr393Q8VGR6 312 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dok4Q99KE3 325 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Nipsnap3bQ9CQE1 247 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Olfr620E9PZ66 313 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 CtsdP18242 410 aaKnown RBP16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Sox8Q04886 464 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Rnf43Q5NCP0 784 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zfp78Q5U406 512 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Pim2Q62070 370 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dclk2Q6PGN3 756 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zcchc14Q8VIG0 956 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dio3Q91ZI8 304 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Det1Q9D0A0 550 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dcaf6Q9DC22 876 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hmg20aQ9DC33 346 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dll4Q9JI71 686 aa16.78■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Fam166bA2AIP0 273 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zfp992B1ASD8 573 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Matn3O35701 481 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Apex1P28352 317 aaKnown RBP16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Hdgfl2Q3UMU9 669 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zzz3Q6KAQ7 910 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Trim17Q7TPM3 477 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Sgo2Q7TSY8 1164 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Fam205cQ80YD3 371 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Elmo2Q8BHL5 732 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Zfp991Q8R1N3 573 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Cyp3a44Q9EQW4 504 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 BC035947B2RQY6 695 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Kcnk2P97438 426 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 CfiQ61129 603 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Slc6a3Q61327 619 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Cfap97Q6ZPR1 541 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 LdhdQ7TNG8 484 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Dlgap1Q9D415 992 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Oser1Q9D722 291 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 Efcab12V9GXH0 673 aa16.77■□□□□ 0.28
Ctcf-201ENSMUST00000005841 ThrbP37242 461 aa16.77■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mup21Q80YX8 181 aa16.77■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mterf2Q8BKY8 385 aa16.77■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ptrh1Q8BW00 204 aa16.77■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Kiaa2013Q91X21 634 aa16.77■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Extl1Q9JKV7 669 aa16.77■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fbxo16Q9QZM9 334 aa16.77■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gabrr3B2RXA8 464 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gm17175E9Q528 179 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 F3P20352 294 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Rbp1Q00915 135 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fam49aQ8BHZ0 323 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Kct2Q8K201 259 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pcdhb11Q91UZ8 797 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Trpd52l3Q9CQ14 231 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cdc20Q9JJ66 499 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms