RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TRIP10Q15642 601 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 GSTA3Q16772 222 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 ATXN7L2Q5T6C5 722 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 TXNDC8Q6A555 127 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 Q6ZNB5 142 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 SIDT2Q8NBJ9 832 aaKnown RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 BHLHE22Q8NFJ8 381 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-211ENST00000641213 OR9I1Q8NGQ6 314 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 ALG14Q96F25 216 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 KCNA7Q96RP8 456 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 HACD3Q9P035 362 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 SARDHQ9UL12 918 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 PCDHB9Q9Y5E1 797 aa16.97■□□□□ 0.31
PHGDH-211ENST00000641213 DPPA5A6NC42 116 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 TRIM38O00635 465 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 ACOT8O14734 319 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 PIP5K1BO14986 540 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 TSPAN12O95859 305 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 URODP06132 367 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 PSMD8P48556 350 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 CLCN4P51793 760 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 MRPS22P82650 360 aaKnown RBP16.96■□□□□ 0.31
PHGDH-211ENST00000641213 GEN1Q17RS7 908 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 CAPRIN2Q6IMN6 1127 aaKnown RBP16.96■□□□□ 0.31
PHGDH-211ENST00000641213 PQLC1Q8N2U9 271 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 PLCD3Q8N3E9 789 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 PPP2R3CQ969Q6 453 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 TOX2Q96NM4 488 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 NR1H4Q96RI1 486 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-211ENST00000641213 SLC25A23Q9BV35 468 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 EBF3Q9H4W6 596 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 IL21Q9HBE4 155 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 ADA2Q9NZK5 511 aa16.96■□□□□ 0.31
PHGDH-211ENST00000641213 DNMT3BQ9UBC3 853 aaKnown RBP16.96■□□□□ 0.31
PHGDH-211ENST00000641213 A0A1B0GTL3 188 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 TYW5A2RUC4 315 aaKnown RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 SYCE1LA8MT33 242 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 BTN3A1O00481 513 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 PRAMEF12O95522 483 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 OLFM2O95897 454 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 CCL5P13501 91 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 GPX3P22352 226 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 ACADVLP49748 655 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 XIAPP98170 497 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 LCP2Q13094 533 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 FBXO48Q5FWF7 155 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 PAOXQ6QHF9 649 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 DDX53Q86TM3 631 aaKnown RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 FAM156AQ8NDB6 213 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 CD200R1Q8TD46 325 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 BHMTQ93088 406 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 EID2BQ96D98 161 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 TUBB1Q9H4B7 451 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 SEMA4BQ9NPR2 832 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 IL17CQ9P0M4 197 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 C6orf203Q9P0P8 240 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 TRMT6Q9UJA5 497 aaKnown RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 ZNF711Q9Y462 761 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 CPQQ9Y646 472 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 MAGEA13PA6NCF6 341 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 E7ENX8 843 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 K7ERQ8 282 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 KLK8O60259 260 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 RPS17P08708 135 aaKnown RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 TCN1P20061 433 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 MNX1P50219 401 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 APLP1P51693 650 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 AQP4P55087 323 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 STX1BP61266 288 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 CDH18Q13634 790 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 AARS2Q5JTZ9 985 aaKnown RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 OGFRL1Q5TC84 451 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 ANKS6Q68DC2 871 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 ZFP1Q6P2D0 407 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 TAS2R42Q7RTR8 314 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 FUNDC1Q8IVP5 155 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 EEF1AKMT1Q8WVE0 214 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 RC3H2Q9HBD1 1191 aaKnown RBP16.95■□□□□ 0.3
PHGDH-211ENST00000641213 SPG21Q9NZD8 308 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 DLGAP2Q9P1A6 1054 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 GIMAP2Q9UG22 337 aa16.95■□□□□ 0.3
PHGDH-211ENST00000641213 PIKFYVEQ9Y2I7 2098 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 MRASO14807 208 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 PEX1O43933 1283 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 NRP2O60462 931 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 SPATA31D3P0C874 917 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 CTPS1P17812 591 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 PTGER3P43115 390 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 ATXN3P54252 364 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-211ENST00000641213 ADARP55265 1226 aaKnown RBP16.94■□□□□ 0.3
PHGDH-211ENST00000641213 IL2P60568 153 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 GRB7Q14451 532 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 SPATA31D4Q6ZUB0 917 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 LYSMD3Q7Z3D4 306 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 PHYKPLQ8IUZ5 450 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 MFN1Q8IWA4 741 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 FAM217AQ8IXS0 508 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 DDIASQ8IXT1 998 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 APCDD1Q8J025 514 aa16.94■□□□□ 0.3
PHGDH-211ENST00000641213 DCAF4L2Q8NA75 395 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms