RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 MCCC1Q96RQ3 725 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-208ENST00000641023 HEPHQ9BQS7 1158 aa17.18■□□□□ 0.34
PHGDH-208ENST00000641023 EML4Q9HC35 981 aaKnown RBP17.18■□□□□ 0.34
PHGDH-208ENST00000641023 CYP4F12Q9HCS2 524 aa17.18■□□□□ 0.34
PHGDH-208ENST00000641023 ACSS2Q9NR19 701 aa17.18■□□□□ 0.34
PHGDH-208ENST00000641023 ARMCX1Q9P291 453 aa17.18■□□□□ 0.34
PHGDH-208ENST00000641023 VTI1BQ9UEU0 232 aa17.18■□□□□ 0.34
PHGDH-208ENST00000641023 LNPEPQ9UIQ6 1025 aa17.18■□□□□ 0.34
PHGDH-208ENST00000641023 TRMT6Q9UJA5 497 aaKnown RBP17.18■□□□□ 0.34
PHGDH-208ENST00000641023 MTF2Q9Y483 593 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-208ENST00000641023 MATN2O00339 956 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 HDAC3O15379 428 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 NFATC1O95644 943 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 ASLP04424 464 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 SRPRAP08240 638 aaKnown RBP17.17■□□□□ 0.34
PHGDH-208ENST00000641023 BMP1P13497 986 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 IMPDH1P20839 514 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 KCNA5P22460 613 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 MPSTP25325 297 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 RAB30Q15771 203 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 GPR33Q49SQ1 333 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 SETMARQ53H47 684 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-208ENST00000641023 CTSL3PQ5NE16 218 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 LYPLAL1Q5VWZ2 237 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 SEL1L3Q68CR1 1132 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 BRAT1Q6PJG6 821 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 SERPINA9Q86WD7 417 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 SPNS2Q8IVW8 549 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 LSMEM2Q8N112 164 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 KIF2BQ8N4N8 673 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 CHST14Q8NCH0 376 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 VN1R2Q8NFZ6 395 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 CYB5D2Q8WUJ1 264 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 RSPRY1Q96DX4 576 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 MRGPRX3Q96LB0 322 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 KLHL32Q96NJ5 620 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 TMEM237Q96Q45 408 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 P2RY12Q9H244 342 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 GDE1Q9NZC3 331 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 TRIM33Q9UPN9 1127 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 NIPSNAP2O75323 286 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 RASSF9O75901 435 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 CISD3P0C7P0 127 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 ESRRAP11474 423 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-208ENST00000641023 PTPN4P29074 926 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 KCNC1P48547 511 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 VASPP50552 380 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-208ENST00000641023 KCNJ2P63252 427 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 NFKB2Q00653 900 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 GALNT1Q10472 559 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-208ENST00000641023 TUBB3Q13509 450 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 RARS2Q5T160 578 aaKnown RBP17.17■□□□□ 0.34
PHGDH-208ENST00000641023 VWA5B1Q5TIE3 1220 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 LRRC66Q68CR7 880 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 TSPAN33Q86UF1 283 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 RBFAQ8N0V3 343 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 GRIN3AQ8TCU5 1115 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 FRS2Q8WU20 508 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 KIAA1191Q96A73 305 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 PRR11Q96HE9 360 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-208ENST00000641023 CLPBQ9H078 707 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 IGFLR1Q9H665 355 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 BRD9Q9H8M2 597 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 ARL8BQ9NVJ2 186 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 ZDHHC2Q9UIJ5 367 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 SLC27A6Q9Y2P4 619 aa17.17■□□□□ 0.34
PHGDH-208ENST00000641023 PRRC2BQ5JSZ5 2229 aaKnown RBP17.17■□□□□ 0.34
PHGDH-208ENST00000641023 TTC34A8MYJ7 566 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 H3BMM5 538 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 GAPDHSO14556 408 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 GPR39O43194 453 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 SP100P23497 879 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 CCR10P46092 362 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 ST8SIA6P61647 398 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 ZDHHC20Q5W0Z9 365 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 SORCS1Q8WY21 1168 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 SLC7A6OSQ96CW6 309 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 RAB3IPQ96QF0 476 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 TRMOQ9BU70 441 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 CRLS1Q9UJA2 301 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 NUP210Q8TEM1 1887 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 CAPN14A8MX76 684 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 TULP3O75386 442 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 CHRM1P11229 460 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 RPS3P23396 243 aaKnown RBP eCLIP17.16■□□□□ 0.343e-8■■■■■ 28.4
PHGDH-208ENST00000641023 NFKBIAP25963 317 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 IL2P60568 153 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 PTSQ03393 145 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 TCEAL5Q5H9L2 206 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 METTL21CQ5VZV1 264 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 FBXW10Q5XX13 1052 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 GET4Q7L5D6 327 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 RAB44Q7Z6P3 723 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 KIRREL3Q8IZU9 778 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 SIDT2Q8NBJ9 832 aaKnown RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 MYLIPQ8WY64 445 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 L3HYPDHQ96EM0 354 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 PTCD3Q96EY7 689 aaKnown RBP17.16■□□□□ 0.34
PHGDH-208ENST00000641023 LRIG1Q96JA1 1093 aa17.16■□□□□ 0.34
PHGDH-208ENST00000641023 CCDC106Q9BWC9 280 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 334.7 ms