RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TMEM215Q68D42 235 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 NAIF1Q69YI7 327 aaPredicted RBP8.02□□□□□ -1.13
SCARB2-220ENST00000640076 PPIL6Q8IXY8 311 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 GSPT2Q8IYD1 628 aaKnown RBP8.02□□□□□ -1.13
SCARB2-220ENST00000640076 PGBD5Q8N414 524 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 SLC44A3Q8N4M1 653 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 NAT8LQ8N9F0 302 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 ZNF527Q8NB42 609 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 HS3ST6Q96QI5 342 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 GORASP1Q9BQQ3 440 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 FAM129AQ9BZQ8 928 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 GLOD4Q9HC38 313 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 CHCHD3Q9NX63 227 aaKnown RBP8.02□□□□□ -1.13
SCARB2-220ENST00000640076 DEC1Q9P2X7 70 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 ANAPC5Q9UJX4 755 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 SHOC2Q9UQ13 582 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 HS3ST2Q9Y278 367 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 PCDHGC4Q9Y5F7 938 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 TCRBV7S3A2A0A539 114 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 K7ERQ8 282 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 NDC80O14777 642 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 TMEM63AO94886 807 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 IL9P15248 144 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 ENPP1P22413 925 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 OPRD1P41143 372 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 EIF2DP41214 584 aaKnown RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 SERPINH1P50454 418 aaKnown RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 MAXP61244 160 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PLIN5Q00G26 463 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CAV1Q03135 178 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 SULT2A1Q06520 285 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 SLC20A2Q08357 652 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 MBLAC2Q68D91 279 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 GRAMD4Q6IC98 578 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PLBD1Q6P4A8 553 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 NEK10Q6ZWH5 1172 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 HOOK3Q86VS8 718 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 KLHDC8BQ8IXV7 354 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CACNA2D3Q8IZS8 1091 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 BBS5Q8N3I7 341 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 GABPB2Q8TAK5 448 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.01□□□□□ -1.135e-8■■■■□ 23.5
SCARB2-220ENST00000640076 WFIKKN2Q8TEU8 576 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PRCCQ92733 491 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 EXOC4Q96A65 974 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 OXNAD1Q96HP4 312 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 RPL10LQ96L21 214 aaKnown RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 FCRL5Q96RD9 977 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 MGME1Q9BQP7 344 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CINPQ9BW66 212 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 POLR1EQ9GZS1 481 aaKnown RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 SLC25A51Q9H1U9 297 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 SOX17Q9H6I2 414 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 WASH6PQ9NQA3 447 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 DNAJC28Q9NX36 388 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 HCN2Q9UL51 889 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PCDHGB2Q9Y5G2 931 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 COL4A2P08572 1712 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CCDC151A5D8V7 595 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 LOC730098B7Z3J9 87 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 E7EVH7 732 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 SMAD6O43541 496 aaKnown RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 POLR2EP19388 210 aaKnown RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 TPSB2P20231 275 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 LSP1P33241 339 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 RGRP47804 291 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 STK19P49842 368 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CDK16Q00536 496 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 ECT2LQ008S8 904 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 DSC2Q02487 901 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 GSTM4Q03013 218 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 KDSRQ06136 332 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 NIPAL4Q0D2K0 466 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 TPSAB1Q15661 275 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PGS1Q32NB8 556 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CCBE1Q6UXH8 406 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 LINC00528Q8N1L1 170 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 TERB1Q8NA31 727 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 ATP11CQ8NB49 1132 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 SPATA22Q8NHS9 363 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 ARRDC2Q8TBH0 407 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CSGALNACT1Q8TDX6 532 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 IMP4Q96G21 291 aaKnown RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 PPP1R2P1Q96PQ5 205 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 FMO2Q99518 471 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 SEMA3CQ99985 751 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 MLPHQ9BV36 600 aaPredicted RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CIPCQ9C0C6 399 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 NRSN2Q9GZP1 204 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 BTBD1Q9H0C5 482 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 TRPV5Q9NQA5 729 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 EIF2B3Q9NR50 452 aaKnown RBP8.01□□□□□ -1.13
SCARB2-220ENST00000640076 HAUS2Q9NVX0 235 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 GRHPRQ9UBQ7 328 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 LHX3Q9UBR4 397 aa8.01□□□□□ -1.13
SCARB2-220ENST00000640076 CORO2BQ9UQ03 480 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms