RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SPRED1Q7Z699 444 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 B3GNT8Q7Z7M8 397 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 PDZD3Q86UT5 571 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 ZNF567Q8N184 647 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 WDR36Q8NI36 951 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 PATE1Q8WXA2 126 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 HTR3CQ8WXA8 447 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 EID2BQ96D98 161 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 SPATA16Q9BXB7 569 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 FOXP3Q9BZS1 431 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 THSD1Q9NS62 852 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 VPS18Q9P253 973 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 FAM153AQ9UHL3 310 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 ZNHIT2Q9UHR6 403 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 ATXN7L1Q9ULK2 861 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 CNOT6Q9ULM6 557 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 PRKAB1Q9Y478 270 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 UNC13CQ8NB66 2214 aa16.63■□□□□ 0.25
CACNA1A-259ENST00000638114 CCDC66A2RUB6 948 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 PMS2P1A4D2B8 440 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 H7C0C1 242 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 ATP5OP48047 213 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 INHBCP55103 352 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 WNT3AP56704 352 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 PCBP4P57723 403 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 ERVPABLB-1P60509 514 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 LRP8Q14114 963 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 ZNF569Q5MCW4 686 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 TMC3Q7Z5M5 1100 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 ARL14Q8N4G2 192 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 SPC24Q8NBT2 197 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 GPR26Q8NDV2 337 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 NAF1Q96HR8 494 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 TMEM74Q96NL1 305 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 SRPK1Q96SB4 655 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 VAT1Q99536 393 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 STRADBQ9C0K7 418 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 ASCL3Q9NQ33 180 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 RAD18Q9NS91 495 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 PCDHGA8Q9Y5G5 932 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 SPO11Q9Y5K1 396 aa16.62■□□□□ 0.25
CACNA1A-259ENST00000638114 ZFC3H1O60293 1989 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 GRID2IPA4D2P6 1211 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 TMX2-CTNND1H3BSU7 103 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 PJA2O43164 708 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 DNAJC6O75061 913 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 CTNNA2P26232 953 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 RBL1P28749 1068 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 CDC25BP30305 580 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 CETN2P41208 172 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 RWDD2BP57060 319 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 DCDC1P59894 354 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 XRCC4Q13426 336 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 NOMO1Q15155 1222 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 MAP9Q49MG5 647 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 IGF2-ASQ6U949 168 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 KDELC1Q6UW63 502 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 CHST15Q7LFX5 561 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 C17orf82Q86X59 251 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 TMEM139Q8IV31 216 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 NAGSQ8N159 534 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 ZNF248Q8NDW4 579 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 LIN37Q96GY3 246 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 CRELD1Q96HD1 420 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 OXNAD1Q96HP4 312 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 FCRL5Q96RD9 977 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 HERPUD2Q9BSE4 406 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 ZSCAN5AQ9BUG6 496 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 OSBPL8Q9BZF1 889 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 C10orf88Q9H8K7 445 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 ARFGAP3Q9NP61 516 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 IMPACTQ9P2X3 320 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 RSPH14Q9UHP6 348 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 TRHDEQ9UKU6 1024 aa16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 PCYT1BQ9Y5K3 369 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-259ENST00000638114 LOC285095A0A1B0GVY8 99 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 AURKAO14965 403 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 SLC25A14O95258 325 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 ALDH4A1P30038 563 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 CHRNA4P43681 627 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 OR1D5P58170 312 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 B4GALNT1Q00973 533 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 OTUD4Q01804 1114 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 AMZ1Q400G9 498 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 RAB11FIP2Q7L804 512 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 TXLNBQ8N3L3 684 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 SLC25A41Q8N5S1 370 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 TRAM1L1Q8N609 369 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 LRRC57Q8N9N7 239 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 IPMKQ8NFU5 416 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 ACTL9Q8TC94 416 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 ALG3Q92685 438 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 PRR11Q96HE9 360 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 SLC46A1Q96NT5 459 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 FERMT1Q9BQL6 677 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 DESI2Q9BSY9 194 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 RMI1Q9H9A7 625 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 NFKBIL1Q9UBC1 381 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 EFR3BQ9Y2G0 817 aa16.6■□□□□ 0.25
CACNA1A-259ENST00000638114 AGRPO00253 132 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms