RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ANP32EQ9BTT0 268 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 ZFYVE1Q9HBF4 777 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 RDH14Q9HBH5 336 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 APPL1Q9UKG1 709 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 AHCTF1Q8WYP5 2266 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 GRID2IPA4D2P6 1211 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 CTNNA1P35221 906 aaKnown RBP17.58■□□□□ 0.4
PNKP-230ENST00000638016 NAP1L1P55209 391 aaKnown RBP17.58■□□□□ 0.4
PNKP-230ENST00000638016 B4GALNT1Q00973 533 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 AMZ1Q400G9 498 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 BBS12Q6ZW61 710 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 TMC3Q7Z5M5 1100 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 GALNT13Q8IUC8 556 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 SLC25A41Q8N5S1 370 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 SPC24Q8NBT2 197 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 WDR48Q8TAF3 677 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 CCHCR1Q8TD31 782 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 ALG3Q92685 438 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 RBM41Q96IZ5 413 aaKnown RBP17.58■□□□□ 0.4
PNKP-230ENST00000638016 ZNF578Q96N58 590 aaPredicted RBP17.58■□□□□ 0.4
PNKP-230ENST00000638016 CDH19Q9H159 772 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 BPIFA1Q9NP55 256 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 KLHL8Q9P2G9 620 aaPredicted RBP17.58■□□□□ 0.4
PNKP-230ENST00000638016 KCNK6Q9Y257 313 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 BPTFQ12830 3046 aa17.58■□□□□ 0.4
PNKP-230ENST00000638016 IGSF10Q6WRI0 2623 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 CCDC187A0A096LP49 1063 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 PPM1DO15297 605 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 NUDT21O43809 227 aaKnown RBP17.57■□□□□ 0.4
PNKP-230ENST00000638016 MTX2O75431 263 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 TNFSF15O95150 251 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 NDST3O95803 873 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 ACP5P13686 325 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 BPIP17213 487 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 RBL1P28749 1068 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 INHBCP55103 352 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 WNT3AP56704 352 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 PCBP4P57723 403 aaKnown RBP17.57■□□□□ 0.4
PNKP-230ENST00000638016 TLE3Q04726 772 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 OLIG2Q13516 323 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 PPP2R5EQ16537 467 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 LRRC69Q6ZNQ3 347 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 USP53Q70EK8 1073 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 CHST15Q7LFX5 561 aaPredicted RBP17.57■□□□□ 0.4
PNKP-230ENST00000638016 OR6C4Q8NGE1 309 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 WDR36Q8NI36 951 aaKnown RBP17.57■□□□□ 0.4
PNKP-230ENST00000638016 HTR3CQ8WXA8 447 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 MRGPRX2Q96LB1 330 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 SLC46A1Q96NT5 459 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 BBC3Q96PG8 261 aaPredicted RBP17.57■□□□□ 0.4
PNKP-230ENST00000638016 GORASP1Q9BQQ3 440 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 NUDT22Q9BRQ3 303 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 SPATA16Q9BXB7 569 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 GPR63Q9BZJ6 419 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 SEMA6CQ9H3T2 930 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 MAGEE1Q9HCI5 957 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 ATXN10Q9UBB4 475 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 ZNHIT2Q9UHR6 403 aa17.57■□□□□ 0.4
PNKP-230ENST00000638016 PACSIN2Q9UNF0 486 aaPredicted RBP17.57■□□□□ 0.4
PNKP-230ENST00000638016 SMG1Q96Q15 3661 aaKnown RBP17.57■□□□□ 0.4
PNKP-230ENST00000638016 MACROD2A1Z1Q3 448 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 RRP8O43159 456 aaKnown RBP17.56■□□□□ 0.4
PNKP-230ENST00000638016 GPR39O43194 453 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 BUD23O43709 281 aaKnown RBP17.56■□□□□ 0.4
PNKP-230ENST00000638016 PYGLP06737 847 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 ZNF8P17098 575 aaPredicted RBP17.56■□□□□ 0.4
PNKP-230ENST00000638016 ITIH1P19827 911 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 ALDH4A1P30038 563 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 CA5AP35218 305 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 VAV2P52735 878 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 OTUD4Q01804 1114 aaKnown RBP17.56■□□□□ 0.4
PNKP-230ENST00000638016 KHDC1Q4VXA5 237 aaKnown RBP17.56■□□□□ 0.4
PNKP-230ENST00000638016 SIRPB2Q5JXA9 342 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 NKAIN2Q5VXU1 208 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 PID1Q7Z2X4 250 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 ZNF438Q7Z4V0 828 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 SLITRK4Q8IW52 837 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 LRRC57Q8N9N7 239 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 IPMKQ8NFU5 416 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 LIN37Q96GY3 246 aaPredicted RBP17.56■□□□□ 0.4
PNKP-230ENST00000638016 BAG1Q99933 345 aaPredicted RBP17.56■□□□□ 0.4
PNKP-230ENST00000638016 LUC7LQ9NQ29 371 aaKnown RBP17.56■□□□□ 0.4
PNKP-230ENST00000638016 FAM153AQ9UHL3 310 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 TMPRSS11EQ9UL52 423 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
PNKP-230ENST00000638016 PCDHGA8Q9Y5G5 932 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 PCDHA3Q9Y5H8 950 aa17.56■□□□□ 0.4
PNKP-230ENST00000638016 LOC285095A0A1B0GVY8 99 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 RHPN2P1A8MT19 583 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 CDRT15L2A8MXV6 281 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 H7C0C1 242 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 APOC4-APOC2K7ER74 178 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 PLD2O14939 933 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 PJA2O43164 708 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 APOC2P02655 101 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 PNLIPP16233 465 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 CTNNA2P26232 953 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 RBMS1P29558 406 aaKnown RBP17.55■□□□□ 0.4
PNKP-230ENST00000638016 CSF2RBP32927 897 aa17.55■□□□□ 0.4
PNKP-230ENST00000638016 UGT1A5P35504 534 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms