RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 FBXO17Q96EF6 278 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 ADGRG7Q96K78 797 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 KLHL15Q96M94 604 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 IL17FQ96PD4 163 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 OR1F2PQ96R84 312 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TWNKQ96RR1 684 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 MXRA8Q9BRK3 442 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC25A33Q9BSK2 321 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DCTN5Q9BTE1 182 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TRMT61BQ9BVS5 477 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TWSG1Q9GZX9 223 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC25A18Q9H1K4 315 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 IL25Q9H293 177 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 NDST4Q9H3R1 872 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 KLHL31Q9H511 634 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 GPR108Q9NPR9 543 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CYSLTR2Q9NS75 346 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC22A11Q9NSA0 550 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SNTG1Q9NSN8 517 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SPATS2LQ9NUQ6 558 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 GGA3Q9NZ52 723 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 KIAA1456Q9P272 454 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 NDRG3Q9UGV2 375 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 FBXO40Q9UH90 709 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CD207Q9UJ71 328 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TBX20Q9UMR3 447 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 GTF2A1LQ9UNN4 478 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CARD8Q9Y2G2 431 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 MCM3APO60318 1980 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DOCK1Q14185 1865 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DENND4AQ7Z401 1863 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DOCK5Q9H7D0 1870 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 PLXNA1Q9UIW2 1896 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SETD5Q9C0A6 1442 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 WDR81Q562E7 1941 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 MYH9P35579 1960 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 NLRC5Q86WI3 1866 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 MEGF6O75095 1541 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SAA2-SAA4A0A096LPE2 208 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 IGHV4-28A0A0C4DH34 117 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CCDC196A0A1B0GTZ2 297 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 DYTNA2CJ06 578 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM90A7PA6NKC0 464 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 HSPB2A8KAH6 182 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM90A22PA8MWA6 464 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM90A12PA8MX19 464 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM90A23PA8MXZ1 464 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TEX22C9J3V5 150 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TIMM23O14925 209 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ZIC3O60481 467 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 AGR2O95994 175 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 AFPP02771 609 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 URODP06132 367 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SPARCP09486 303 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 G6PDP11413 515 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 KRT5P13647 590 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ETFAP13804 333 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 COX7A2P14406 83 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 IL7RP16871 459 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 PTPN2P17706 415 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SRD5A1P18405 259 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 EDN2P20800 178 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 STX2P32856 288 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 KRT9P35527 623 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 IL15P40933 162 aaPredicted RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 AMPHP49418 695 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 HARS2P49590 506 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TUBP50607 506 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 BLKP51451 505 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 RARSP54136 660 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 NR1H2P55055 460 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 BNC1Q01954 994 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC18A2Q05940 514 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM27E3Q08E93 113 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 GOLGA8DPQ0D2H9 430 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ILF3Q12906 894 aaKnown RBP eCLIP1.12□□□□□ -2.231e-9■■□□□ 11.4
SMARCB1-209ENST00000635578 GRIK3Q13003 919 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 MYBPHQ13203 477 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SNTA1Q13424 505 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 DCTN2Q13561 401 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CAMK1Q14012 370 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 DHX34Q14147 1143 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CTTNQ14247 550 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 HSPB2Q16082 182 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 RPE65Q16518 533 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CALCRLQ16602 461 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 HIST2H2ACQ16777 129 aaPredicted RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SOWAHAQ2M3V2 549 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TCTN1Q2MV58 587 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 COL28A1Q2UY09 1125 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 PLEKHO1Q53GL0 409 aaPredicted RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ESCO2Q56NI9 601 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC45A4Q5BKX6 768 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF667Q5HYK9 610 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 EFHC1Q5JVL4 640 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 GPATCH4Q5T3I0 446 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 WDR73Q6P4I2 378 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM81Q6P7N7 255 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 FBXO46Q6PJ61 603 aaPredicted RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SUSD1Q6UWL2 747 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms