RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 VAPBO95292 243 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 BCKDHBP21953 392 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 SSTR1P30872 391 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 NHLH1Q02575 133 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 FGL2Q14314 439 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 ZDHHC20Q5W0Z9 365 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 NRSN1Q8IZ57 195 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 ANKS4BQ8N8V4 417 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 CCT6BQ92526 530 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 PEX13Q92968 403 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 AP2M1Q96CW1 435 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 CDKN2AIPNLQ96HQ2 116 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 RIOK2Q9BVS4 552 aaKnown RBP14.37□□□□□ -0.11
LINC00339-208ENST00000634934 FAM126AQ9BYI3 521 aaPredicted RBP14.37□□□□□ -0.11
LINC00339-208ENST00000634934 NSRP1Q9H0G5 558 aaKnown RBP14.37□□□□□ -0.11
LINC00339-208ENST00000634934 ABCG8Q9H221 673 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 SEMA4AQ9H3S1 761 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 PPCSQ9HAB8 311 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 IL26Q9NPH9 171 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 IL1RAPL1Q9NZN1 696 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 LGALS13Q9UHV8 139 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 MYLKQ15746 1914 aa14.37□□□□□ -0.11
LINC00339-208ENST00000634934 GLYATL1P3A0A0U1RQE8 302 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ZCWPW2A0A1B0GU75 182 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 OR51F1A6NGY5 319 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ACSL3O95573 720 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ABHD2P08910 425 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 MC4RP32245 332 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CCR5P51681 352 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 GPX6P59796 221 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CREB5Q02930 508 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ACVR1Q04771 509 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 LRRC14Q15048 493 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 LONRF1Q17RB8 773 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 SETMARQ53H47 684 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 STEAP4Q687X5 459 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 KIAA0930Q6ICG6 404 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 C3orf62Q6ZUJ4 267 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CYP2U1Q7Z449 544 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 RAVER1Q8IY67 606 aaKnown RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 UNC5BQ8IZJ1 945 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 RIBC1Q8N443 379 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ZBTB44Q8NCP5 570 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 GSDMBQ8TAX9 411 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 TTC25Q96NG3 672 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 PLEKHG4BQ96PX9 1271 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 MYOCQ99972 504 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 SPATA16Q9BXB7 569 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 C1QTNF7Q9BXJ2 289 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CDH19Q9H159 772 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CENPHQ9H3R5 247 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 PLAC1Q9HBJ0 212 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 LRRC4CQ9HCJ2 640 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 FZD3Q9NPG1 666 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 C20orf96Q9NUD7 363 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ZSCAN32Q9NX65 697 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 APPL1Q9UKG1 709 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CAPN7Q9Y6W3 813 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 MEI4A8MW99 385 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 GOLGA8TH3BQL2 631 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 RASGRF2O14827 1237 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 PRAMEF1O95521 474 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 GOT2P00505 430 aaKnown RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 PCCBP05166 539 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 IGHV4-34P06331 123 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 PSMA3P25788 255 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 SLC18A1P54219 525 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 IFT88Q13099 833 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 RASA2Q15283 850 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CHRNA6Q15825 494 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 WSCD2Q2TBF2 565 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ZRANB3Q5FWF4 1079 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 UBAP2Q5T6F2 1119 aaKnown RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 RAET1GQ6H3X3 334 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 AFTPHQ6ULP2 937 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ZNF765Q7L2R6 523 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 PTAR1Q7Z6K3 402 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 TMEFF1Q8IYR6 380 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CCDC197Q8NCU1 140 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 CADM4Q8NFZ8 388 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 GAB3Q8WWW8 586 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 BIRC7Q96CA5 298 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 C19orf43Q9BQ61 176 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 FAM96AQ9H5X1 160 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 KCTD5Q9NXV2 234 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-208ENST00000634934 SLC30A1Q9Y6M5 507 aa14.36□□□□□ -0.11
LINC00339-208ENST00000634934 TRPM6Q9BX84 2022 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 METTL12A8MUP2 240 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 RAD51BO15315 384 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 LATO43561 262 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 SRP72O76094 671 aaKnown RBP14.35□□□□□ -0.11
LINC00339-208ENST00000634934 SHBGP04278 402 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 GSTA2P09210 222 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 ERVK-10P10266 1014 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 CHN1P15882 459 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms