RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TFB2MQ9H5Q4 396 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 SLC28A3Q9HAS3 691 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 IL1RL2Q9HB29 575 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 PIDD1Q9HB75 910 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 NDUFA13Q9P0J0 144 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 DTNAQ9Y4J8 743 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 PLXNB3Q9ULL4 1909 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 TET1Q8NFU7 2136 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 A6NCN8 305 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 CCL22O00626 93 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 GNALP38405 381 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 MAXP61244 160 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 PRAMEP78395 509 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 FOXM1Q08050 763 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 STX5Q13190 355 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 MARC1Q5VT66 337 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 OGFOD2Q6N063 350 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 FBXL22Q6P050 247 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 IYDQ6PHW0 289 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 RNF165Q6ZSG1 346 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 FUNDC1Q8IVP5 155 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 HERC6Q8IVU3 1022 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 SPNS2Q8IVW8 549 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 CHERPQ8IWX8 916 aaKnown RBP7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 AFAP1L2Q8N4X5 818 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 PCDH20Q8N6Y1 951 aaKnown RBP7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 ATP6V0D2Q8N8Y2 350 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 FAM156AQ8NDB6 213 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 SH3RF2Q8TEC5 729 aa7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 C2orf15Q8WU43 125 aaKnown RBP7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 COPS7BQ9H9Q2 264 aaPredicted RBP7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 NLE1Q9NVX2 485 aaPredicted RBP7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 ABI2Q9NYB9 513 aaPredicted RBP7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 MARCH4Q9P2E8 410 aaPredicted RBP7.15□□□□□ -1.27
CTNNA1-244ENST00000627109 OR6C75A6NL08 312 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CNTN5O94779 1100 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 RTN3O95197 1032 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 PGM3O95394 542 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF37AP17032 561 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 IGFBP4P22692 258 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 HOXD9P28356 352 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CASP2P42575 452 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ALDH7A1P49419 539 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ADARP55265 1226 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 SEMA3AQ14563 771 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CYTH1Q15438 398 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 KIF19Q2TAC6 998 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 SDHAF4Q5VUM1 108 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 PSRC1Q6PGN9 363 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 LIMD1Q9UGP4 676 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 A0A0C4DFX4 3053 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 NEMP2A6NFY4 417 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CAPN8A6NHC0 703 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 KIAA0355O15063 1070 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 MUSKO15146 869 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CRTAMO95727 393 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 F11P03951 625 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ALDOCP09972 364 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 HSD17B1P14061 328 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 MYOGP15173 224 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CD86P42081 329 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 DSC2Q02487 901 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 RBBP5Q15291 538 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CNPY1Q3B7I2 92 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC39A12Q504Y0 691 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 NOMO2Q5JPE7 1267 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 RARS2Q5T160 578 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 KLC3Q6P597 504 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 KLHDC10Q6PID8 442 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF280BQ86YH2 543 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 MIB1Q86YT6 1006 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 MINDY1Q8N5J2 469 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ANKFN1Q8N957 763 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 BRSK1Q8TDC3 778 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 OVCA2Q8WZ82 227 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 NSMCE3Q96MG7 304 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 AARSD1Q9BTE6 412 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 DERL2Q9GZP9 239 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 Q9H521 79 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CWH43Q9H720 699 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 EPS15L1Q9UBC2 864 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 PFDN2Q9UHV9 154 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 APPL1Q9UKG1 709 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ITM2BQ9Y287 266 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 TRAF6Q9Y4K3 522 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 HELZP42694 1942 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ATP6AP2A0A1C7CYW4 349 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 PABPN1LA6NDY0 278 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 ATP6AP2O75787 350 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 RPP40O75818 363 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 RPS17P08708 135 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CCDC166P0CW27 439 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 SLC7A1P30825 629 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 STC1P52823 247 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 PSME3P61289 254 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 XKR7Q5GH72 579 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 HABP4Q5JVS0 413 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 CNKSR3Q6P9H4 555 aa7.14□□□□□ -1.27
CTNNA1-244ENST00000627109 RPS27LQ71UM5 84 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms