RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	LMAN1	P49257	510 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	CLCNKB	P51801	687 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	CXCL9	Q07325	125 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	NIPAL4	Q0D2K0	466 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	CDC16	Q13042	620 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	PRPF4B	Q13523	1007 aa	Known RBP	5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	RASA2	Q15283	850 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	EDRF1	Q3B7T1	1238 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	ZNF667	Q5HYK9	610 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	TTI2	Q6NXR4	508 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	PRSS45	Q7RTY3	260 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	MRPL10	Q7Z7H8	261 aa	Known RBP	5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	ARHGAP12	Q8IWW6	846 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	FAM185A	Q8N0U4	392 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	MMP21	Q8N119	569 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	NRAC	Q8N912	160 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	RADIL	Q96JH8	1075 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	ZMAT2	Q96NC0	199 aa	Known RBP	5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	TEX13A	Q9BXU3	409 aa	Predicted RBP	5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	HSPB7	Q9UBY9	170 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	HACL1	Q9UJ83	578 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	ABCC4	O15439	1325 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	RIC1	Q4ADV7	1423 aa		5.88	□□□□□ -1.47
NRXN1-223	ENST00000625891	CENPF	P49454	3210 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	MKI67	P46013	3256 aa	Known RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	DDTL	A6NHG4	134 aa	Predicted RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891		H7C0S8	307 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	SCAMP1	O15126	338 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	TACC1	O75410	805 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	ERAL1	O75616	437 aa	Known RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	NDUFB8	O95169	186 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	PGM3	O95394	542 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	RARG	P13631	454 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	TTK	P33981	857 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	DPP6	P42658	865 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	KRTAP10-6	P60371	365 aa	Predicted RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	GAD2	Q05329	585 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	SLC18A2	Q05940	514 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	AIMP1	Q12904	312 aa	Known RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	CSTF3	Q12996	717 aa	Known RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	TAF11	Q15544	211 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	PXDC1	Q5TGL8	231 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	ARMC3	Q5W041	872 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	NUGGC	Q68CJ6	796 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	FAM160B2	Q86V87	743 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	ZDHHC23	Q8IYP9	409 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	DPP10	Q8N608	796 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	GPATCH11	Q8N954	259 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	LRRC57	Q8N9N7	239 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	TMEM174	Q8WUU8	243 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	TMEM170A	Q8WVE7	144 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	PERP	Q96FX8	193 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	CNDP2	Q96KP4	475 aa	Known RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	B3GNT4	Q9C0J1	378 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	SLC32A1	Q9H598	525 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	SLC35C2	Q9NQQ7	365 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	C20orf141	Q9NUB4	165 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	GIMAP2	Q9UG22	337 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	A4GNT	Q9UNA3	340 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	HS3ST3B1	Q9Y662	390 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	SESN1	Q9Y6P5	492 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	SLC4A4	Q9Y6R1	1079 aa		5.87	□□□□□ -1.47
NRXN1-223	ENST00000625891	BRCA2	P51587	3418 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	TMEM272	A0A1B0GTI8	110 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	FRMD3	A2A2Y4	597 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	CBY3	A6NI87	242 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	FAM157A	C9JC47	383 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	TAF4	O00268	1085 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	LDLRAD4	O15165	306 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	PAGE4	O60829	102 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	HOXB5	P09067	269 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	GCH1	P30793	250 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	PBX3	P40426	434 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	ME1	P48163	572 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	ALDH7A1	P49419	539 aa	Known RBP	5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	GMPS	P49915	693 aa	Predicted RBP	5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	ARSF	P54793	590 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	CDH8	P55286	799 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	ROR1	Q01973	937 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	LRMP	Q12912	555 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	DEFB115	Q30KQ5	88 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	ODF3L2	Q3SX64	289 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	RAB41	Q5JT25	222 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	SERTAD4-AS1	Q5TG53	156 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	TMEM71	Q6P5X7	295 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	CHST9	Q7L1S5	443 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	SERPINA11	Q86U17	422 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	WASF1	Q92558	559 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	SGCD	Q92629	289 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	ABHD8	Q96I13	439 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	WDR77	Q9BQA1	342 aa	Predicted RBP	5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	TASP1	Q9H6P5	420 aa		5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	ZCCHC17	Q9NP64	241 aa	Known RBP	5.86	□□□□□ -1.47
NRXN1-223	ENST00000625891	SPATS2L	Q9NUQ6	558 aa	Known RBP	5.86	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms