RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HAO1Q9UJM8 370 aa4.21□□□□□ -1.74
BRCA1-229ENST00000621897 FAF1Q9UNN5 650 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-229ENST00000621897 TCF19Q9Y242 345 aa4.21□□□□□ -1.74
BRCA1-229ENST00000621897 KLHL20Q9Y2M5 609 aa4.21□□□□□ -1.74
BRCA1-229ENST00000621897 FAM237AA0A1B0GTK4 181 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 CCDC189A1A4V9 331 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 CTAGE9A4FU28 777 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 FAM72CH0Y354 149 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 DVL1O14640 695 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 ZNHIT1O43257 154 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 SPINT2O43291 252 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 TGFB1I1O43294 461 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 HSP90AA1P07900 732 aaKnown RBP4.2□□□□□ -1.74
BRCA1-229ENST00000621897 CTAGE8P0CG41 777 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 XBP1P17861 261 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 POLR2CP19387 275 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-229ENST00000621897 ICAM3P32942 547 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 CDKN1AP38936 164 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 APOBEC1P41238 236 aaKnown RBP4.2□□□□□ -1.74
BRCA1-229ENST00000621897 FASLGP48023 281 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 DVL1P1P54792 670 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-229ENST00000621897 CLDN20P56880 219 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 TBX2Q13207 712 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-229ENST00000621897 DECR1Q16698 335 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 PDSS1Q5T2R2 415 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 FAM72AQ5TYM5 149 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 OR7E24Q6IFN5 339 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 FAM72DQ6L9T8 149 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 FAM171BQ6P995 826 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 FAM72BQ86X60 149 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 CTAGE4Q8IX94 777 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 CNTROBQ8N137 903 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 OR14L1PQ8NHC6 308 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 TMEM255BQ8WV15 326 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 SLC44A1Q8WWI5 657 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 TAAR8Q969N4 342 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 ZUFSPQ96AP4 578 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 SAAL1Q96ER3 474 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 RRP36Q96EU6 259 aaKnown RBP4.2□□□□□ -1.74
BRCA1-229ENST00000621897 EIF2AK1Q9BQI3 630 aaKnown RBP4.2□□□□□ -1.74
BRCA1-229ENST00000621897 CRYL1Q9Y2S2 319 aa4.2□□□□□ -1.74
BRCA1-229ENST00000621897 NKX2-2O95096 273 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 APOHP02749 345 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-229ENST00000621897 ARL1P40616 181 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-229ENST00000621897 EIF3BP55884 814 aaKnown RBP4.19□□□□□ -1.74
BRCA1-229ENST00000621897 SREBF2Q12772 1141 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 TMEM95Q3KNT9 176 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 CDONQ4KMG0 1287 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 C18orf63Q68DL7 685 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 CDC73Q6P1J9 531 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 INO80CQ6PI98 192 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-229ENST00000621897 ATG9AQ7Z3C6 839 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 CACNA2D4Q7Z3S7 1137 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 KLHDC9Q8NEP7 349 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 OR52I2Q8NH67 350 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 LINGO1Q96FE5 620 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 PIP5K1AQ99755 562 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 PRKRIP1Q9H875 184 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-229ENST00000621897 FKRPQ9H9S5 495 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 SCPEP1Q9HB40 452 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 LTB4R2Q9NPC1 389 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 DDX43Q9NXZ2 648 aaKnown RBP4.19□□□□□ -1.74
BRCA1-229ENST00000621897 PDP2Q9P2J9 529 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 FBXL2Q9UKC9 423 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 SLC13A4Q9UKG4 626 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 ACSL5Q9ULC5 683 aa4.19□□□□□ -1.74
BRCA1-229ENST00000621897 ZCWPW2A0A1B0GU75 182 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 CCER2I3L3R5 266 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 FAM106CPP0CH98 169 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 ZNF182P17025 639 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-229ENST00000621897 MAN1A1P33908 653 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 ATP12AP54707 1039 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 EEF1A1P68104 462 aaKnown RBP4.18□□□□□ -1.74
BRCA1-229ENST00000621897 RPL24P83731 157 aaKnown RBP4.18□□□□□ -1.74
BRCA1-229ENST00000621897 GRIK2Q13002 908 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 OLIG2Q13516 323 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 ZRSR2Q15696 482 aaKnown RBP4.18□□□□□ -1.74
BRCA1-229ENST00000621897 TMEM35AQ53FP2 167 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 DCST1Q5T197 706 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 EEF1A1P5Q5VTE0 462 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 ACAD10Q6JQN1 1059 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 TTI2Q6NXR4 508 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 TSSK4Q6SA08 328 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 ZNF524Q96C55 264 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 RRNAD1Q96FB5 475 aaKnown RBP4.18□□□□□ -1.74
BRCA1-229ENST00000621897 DUX3Q96PT4 197 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 NAP1L4Q99733 375 aaKnown RBP4.18□□□□□ -1.74
BRCA1-229ENST00000621897 NEURL2Q9BR09 285 aa4.18□□□□□ -1.74
BRCA1-229ENST00000621897 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-229ENST00000621897 CNOT8Q9UFF9 292 aaKnown RBP4.18□□□□□ -1.74
BRCA1-229ENST00000621897 C1orf226A1L170 272 aa4.17□□□□□ -1.74
BRCA1-229ENST00000621897 NPIPB15A6NHN6 443 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-229ENST00000621897 A6NLC8 198 aa4.17□□□□□ -1.74
BRCA1-229ENST00000621897 PMS2P5A8MQ11 134 aa4.17□□□□□ -1.74
BRCA1-229ENST00000621897 FAM90A26D6RGX4 464 aa4.17□□□□□ -1.74
BRCA1-229ENST00000621897 M0QZ24 198 aa4.17□□□□□ -1.74
BRCA1-229ENST00000621897 EDIL3O43854 480 aa4.17□□□□□ -1.74
BRCA1-229ENST00000621897 PAGE4O60829 102 aa4.17□□□□□ -1.74
BRCA1-229ENST00000621897 PRSS1P07477 247 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms