RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 NETO2Q8NC67 525 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF671Q8TAW3 534 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 POF1BQ8WVV4 589 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 NDRG1Q92597 394 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 TAPBPLQ9BX59 468 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CARS2Q9HA77 564 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 MFHAS1Q9Y4C4 1052 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LTBP3Q9NS15 1303 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CENPXA8MT69 81 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LIN7AO14910 233 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 INSIG1O15503 277 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 DCXO43602 365 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 KLRC4O43908 158 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CSTF2P33240 577 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF132P52740 706 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 NAE1Q13564 534 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 NR1D2Q14995 579 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PTPN20Q4JDL3 420 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ARMC4Q5T2S8 1044 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LRRC55Q6ZSA7 311 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 BNIPLQ7Z465 357 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PEG10Q86TG7 708 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ADHFE1Q8IWW8 467 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ULK2Q8IYT8 1036 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 SVOPQ8N4V2 548 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 BAP1Q92560 729 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CENPIQ92674 756 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 EBNA1BP2Q99848 306 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 MRPS26Q9BYN8 205 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 EQTNQ9NQ60 294 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LEF1Q9UJU2 399 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CDC14AQ9UNH5 594 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PCDHB3Q9Y5E6 796 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PCDHGC4Q9Y5F7 938 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LAMTOR5O43504 91 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 TIPRLO75663 272 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 HOXB2P14652 356 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PPIBP23284 216 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LRPAP1P30533 357 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 STXBP1P61764 594 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 EVX2Q03828 476 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PPIDQ08752 370 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 RFTN2Q52LD8 501 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ARMCX4Q5H9R4 360 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ATXN7L2Q5T6C5 722 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 TMEM220Q6QAJ8 160 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 GCNT7Q6ZNI0 430 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC26A9Q7LBE3 791 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 TAC4Q86UU9 113 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 C19orf18Q8NEA5 215 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ATP6V1C2Q8NEY4 427 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 RP9Q8TA86 221 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 JOSD2Q8TAC2 188 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LRRN4Q8WUT4 740 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 B3GALT6Q96L58 329 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CSPG4P5Q96PW8 444 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 TBC1D10AQ9BXI6 508 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC2A4RGQ9NR83 387 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 COL20A1Q9P218 1284 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 NFAT5O94916 1531 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 LINC00854A0A1B0GVQ3 168 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 EPHB6O15197 1021 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 TGFB1I1O43294 461 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 LRATO95237 230 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 KLK3P07288 261 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 FOSL2P15408 326 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 GSTT1P30711 240 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 CCKBRP32239 447 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 PSMD4P55036 377 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 CDC42P60953 191 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 RIPK1Q13546 671 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 PUS10Q3MIT2 529 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ZSCAN1Q8NBB4 408 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ZCCHC10Q8TBK6 192 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 PHF10Q8WUB8 498 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 IPCEF1Q8WWN9 437 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 C12orf66Q96MD2 445 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 CPXM1Q96SM3 734 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 OSBPL2Q9H1P3 480 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ARHGEF3Q9NR81 526 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 SPATA6Q9NWH7 488 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 BTRCQ9Y297 605 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 TMEM150CB9EJG8 249 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 PPP1R11O60927 126 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 TNFP01375 233 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 GSTM5P46439 218 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ITGA1P56199 1179 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ECT2LQ008S8 904 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 CARD16Q5EG05 197 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF776Q68DI1 518 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ANO7Q6IWH7 933 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 SCIMPQ6UWF3 145 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 MMAAQ8IVH4 418 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ST13P5Q8NFI4 369 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 OR4A15Q8NGL6 344 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 FBXO30Q8TB52 745 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 STYXQ8WUJ0 223 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 FAM84AQ96KN4 292 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 KLHL25Q9H0H3 589 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 PCBD2Q9H0N5 130 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms