RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 FIBPO43427 364 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 FAM155BO75949 473 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 CKMT1AP12532 417 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 DCTDP32321 178 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 KIF5BP33176 963 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 PTPN9P43378 593 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 GPR12P47775 334 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 GNAQP50148 359 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 UBE2HP62256 183 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 IL13RA2Q14627 380 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 RPE65Q16518 533 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 AP5B1Q2VPB7 878 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 ZNF484Q5JVG2 852 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 JMJD6Q6NYC1 403 aaPredicted RBP5.15□□□□□ -1.59
VPS29-212ENST00000621131 ZNF329Q86UD4 541 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 MYLK4Q86YV6 388 aaPredicted RBP5.15□□□□□ -1.59
VPS29-212ENST00000621131 POF1BQ8WVV4 589 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 NCSTNQ92542 709 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 ATOH1Q92858 354 aaPredicted RBP5.15□□□□□ -1.59
VPS29-212ENST00000621131 SDCCAG3Q96C92 435 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 TWSG1Q9GZX9 223 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 GAREM1Q9H706 876 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 CLK4Q9HAZ1 481 aaKnown RBP5.15□□□□□ -1.59
VPS29-212ENST00000621131 LY9Q9HBG7 655 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 WDR6Q9NNW5 1121 aaKnown RBP5.15□□□□□ -1.59
VPS29-212ENST00000621131 ORC3Q9UBD5 711 aaPredicted RBP5.15□□□□□ -1.59
VPS29-212ENST00000621131 SWAP70Q9UH65 585 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 MTMR6Q9Y217 621 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 MORC2Q9Y6X9 1032 aaPredicted RBP5.15□□□□□ -1.59
VPS29-212ENST00000621131 ECM29Q5VYK3 1845 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 GAKO14976 1311 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 MYH1P12882 1939 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 MYH8P13535 1937 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 DDX60LQ5H9U9 1706 aaKnown RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 SPTBN5Q9NRC6 3674 aaKnown RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 BRCA2P51587 3418 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 HTTP42858 3142 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 CDK5RAP2Q96SN8 1893 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 LOC102724159A0A0B4J2E5 919 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 F5H423 210 aaPredicted RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 JAK2O60674 1132 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 DEXIO95424 95 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 SNRNP70P08621 437 aaKnown RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 IFNAR1P17181 557 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 C21orf33P30042 268 aaPredicted RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 DEKP35659 375 aaKnown RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 MMP14P50281 582 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 POU3F1Q03052 451 aaPredicted RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 POU5F1BQ06416 359 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 ST3GAL1Q11201 340 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 ILF3Q12906 894 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS29-212ENST00000621131 SLC39A14Q15043 492 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 PWP2Q15269 919 aaKnown RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 ZNF718Q3SXZ3 478 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 ZNF672Q499Z4 452 aaPredicted RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 C12orf60Q5U649 245 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 GFI1BQ5VTD9 330 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 WBP2NLQ6ICG8 309 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 GALNT15Q8N3T1 639 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 ZBTB8BQ8NAP8 495 aaPredicted RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 MCPH1Q8NEM0 835 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 LILRB1Q8NHL6 650 aaPredicted RBP5.14□□□□□ -1.59
VPS29-212ENST00000621131 GOLGA1Q92805 767 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 PSMD1Q99460 953 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 LZTS2Q9BRK4 669 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 SLC26A6Q9BXS9 759 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 DBNDD1Q9H9R9 158 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 CNPY2Q9Y2B0 182 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS29-212ENST00000621131 DAAM1Q9Y4D1 1078 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 ELP1O95163 1332 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 FLT1P17948 1338 aa5.14□□□□□ -1.59
VPS29-212ENST00000621131 PSME4Q14997 1843 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 TTC28Q96AY4 2481 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 A0A0U1RQJ8 604 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 DYTNA2CJ06 578 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 KDM4EB2RXH2 506 aaPredicted RBP5.13□□□□□ -1.59
VPS29-212ENST00000621131 PRDM1O75626 825 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 VEGFAP15692 232 aaPredicted RBP5.13□□□□□ -1.59
VPS29-212ENST00000621131 DLX5P56178 289 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 TFAP4Q01664 338 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 CYP4A11Q02928 519 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 CUL4BQ13620 913 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 TIGD6Q17RP2 521 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 KRTAP24-1Q3LI83 254 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 SH2D4BQ5SQS7 431 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 CCDC183Q5T5S1 534 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 CAVIN1Q6NZI2 390 aaKnown RBP5.13□□□□□ -1.59
VPS29-212ENST00000621131 GJB7Q6PEY0 223 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 CCDC73Q6ZRK6 1079 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 ZNF114Q8NC26 417 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 PKP4Q99569 1192 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 CTDSP1Q9GZU7 261 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 RETREG1Q9H6L5 497 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 TCP11L1Q9NUJ3 509 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 CD207Q9UJ71 328 aa5.13□□□□□ -1.59
VPS29-212ENST00000621131 NOL7Q9UMY1 257 aaKnown RBP5.13□□□□□ -1.59
VPS29-212ENST00000621131 LAMA3Q16787 3333 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 GRID2O43424 1007 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 KRT36O76013 467 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms