RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SLC30A1Q9Y6M5 507 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 SULT1C4O75897 302 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 MBL2P11226 248 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 HRH2P25021 359 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 MAP4P27816 1152 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 RCAN2Q14206 197 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 BRMS1LQ5PSV4 323 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 PDPRQ8NCN5 879 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 OSCP1Q8WVF1 389 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 TMEM74Q96NL1 305 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 MTG1Q9BT17 334 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 KCTD3Q9Y597 815 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 ANKRD12Q6UB98 2062 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 PATJQ8NI35 1801 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 MEIS3P2A8K0S8 358 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 SHMT2P34897 504 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 CD86P42081 329 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 EEFSECP57772 596 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 MAXP61244 160 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 ATP1A4Q13733 1029 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 FUT11Q495W5 492 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 RTL3Q8N8U3 475 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 C3orf58Q8NDZ4 430 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 TRUB1Q8WWH5 349 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 SNX19Q92543 992 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 BIRC7Q96CA5 298 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 MUS81Q96NY9 551 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 ATOH8Q96SQ7 321 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 SEPHS2Q99611 448 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 NOL6Q9H6R4 1146 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 NT5MQ9NPB1 228 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 MPP6Q9NZW5 540 aa19.49■□□□□ 0.71
PDLIM3-212ENST00000620787 GBF1Q92538 1859 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 DYNC1LI2O43237 492 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 MSI1O43347 362 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 EEDO75530 441 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 BAIAP3O94812 1187 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 MMP2P08253 660 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 PRR35P0CG20 571 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 XAF1Q6GPH4 301 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 GRAMD4Q6IC98 578 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 BPIFB1Q8TDL5 484 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 V9GYQ6 96 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 KPNA6O60684 536 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 ALBP02768 609 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 KCNK10P57789 538 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 ECT2LQ008S8 904 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 CBX2Q14781 532 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 NR1D2Q14995 579 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 C14orf80Q86SX3 495 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 LEMD2Q8NC56 503 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 GLT1D1Q96MS3 346 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 RTP3Q9BQQ7 232 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 CHID1Q9BWS9 393 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 TDRD1Q9BXT4 1180 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 AIG1Q9NVV5 245 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 SLAMF8Q9P0V8 285 aa19.48■□□□□ 0.71
PDLIM3-212ENST00000620787 PTPRDP23468 1912 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 VPS4BO75351 444 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 BCL10O95999 233 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 ZNF37AP17032 561 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 CES1P23141 567 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 MRPL19P49406 292 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 CLCNKBP51801 687 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 MLLT10P55197 1068 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 FXNQ16595 210 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 AASDHQ4L235 1098 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 SPATA19Q7Z5L4 167 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 RIMKLAQ8IXN7 391 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 SCML4Q8N228 414 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 SCAMP5Q8TAC9 235 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 PABPC5Q96DU9 382 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 NEURL2Q9BR09 285 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 NANOGQ9H9S0 305 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 NTN4Q9HB63 628 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 GMIPQ9P107 970 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 PCDHGA11Q9Y5H2 935 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 DOCK4Q8N1I0 1966 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 E9PAM4 449 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 C1RP00736 705 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 CYBBP04839 570 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 EEF1B2P24534 225 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 SUOXP51687 545 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 DSC2Q02487 901 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 GNA12Q03113 381 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 CLCQ05315 142 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 ZIK1Q3SY52 487 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 BROXQ5VW32 411 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 TWF2Q6IBS0 349 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 NIPAL1Q6NVV3 410 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 GALNT18Q6P9A2 607 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 ITIH5Q86UX2 942 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 SFRP1Q8N474 314 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 RHEBL1Q8TAI7 183 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 CSF3RQ99062 836 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 BDH2Q9BUT1 245 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 C1orf50Q9BV19 199 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 CCDC68Q9H2F9 335 aa19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 GPN2Q9H9Y4 310 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-212ENST00000620787 RIC8BQ9NVN3 520 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms