RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TGFBR2P37173 567 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 AP3M2P53677 418 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 RBBP4Q09028 425 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 C1DQ13901 141 aaKnown RBP5.02□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM132DQ14C87 1099 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 ATP13A5Q4VNC0 1218 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 TTC23LQ6PF05 361 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 CHSY3Q70JA7 882 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 NCSTNQ92542 709 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 NIF3L1Q9GZT8 377 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 DHRS7Q9Y394 339 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 NT5C1B-RDH14C9J2C7 533 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 H7C2Y5 167 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 BTN3A1O00481 513 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 ERN1O75460 977 aaKnown RBP5.02□□□□□ -1.61
VPS13D-214ENST00000620676 SCGNO76038 276 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 ASS1P00966 412 aaKnown RBP5.02□□□□□ -1.61
VPS13D-214ENST00000620676 SPANXN3Q5MJ09 141 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 CNSTQ6PJW8 725 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 SRFBP1Q8NEF9 429 aaKnown RBP5.02□□□□□ -1.61
VPS13D-214ENST00000620676 TRPV1Q8NER1 839 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 KLHL6Q8WZ60 621 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 BTG4Q9NY30 223 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 METP08581 1390 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 CYP3A7-CYP3A51PA0A087WV96 503 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 SGCEO43556 437 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 PCP11498 1178 aaKnown RBP5.02□□□□□ -1.61
VPS13D-214ENST00000620676 CYP3A7P24462 503 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 ARNTP27540 789 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 PLA2G16P53816 162 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 MAB21L1Q13394 359 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 MOGSQ13724 837 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 GALEQ14376 348 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 KRT33BQ14525 404 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 OGFRL1Q5TC84 451 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF773Q6PK81 442 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 PGAM4Q8N0Y7 254 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 CELF2-AS1Q8N7Q2 184 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 AIFM2Q9BRQ8 373 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 FAM237AA0A1B0GTK4 181 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 JRKO75564 520 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 RPLP0P05388 317 aaKnown RBP5.02□□□□□ -1.61
VPS13D-214ENST00000620676 MS4A2Q01362 244 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 PCDH1Q08174 1060 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 DNAJC19Q96DA6 116 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 PNPLA8Q9NP80 782 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 SIRPGQ9P1W8 387 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 SORCS3Q9UPU3 1222 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 PRR36Q9H6K5 1346 aa5.02□□□□□ -1.61
VPS13D-214ENST00000620676 SAMD9Q5K651 1589 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TRAV20A0A0B4J274 112 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 HRGP04196 525 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF14P17017 642 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 DSG3P32926 999 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 NFATC3Q12968 1075 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 STARD3Q14849 445 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CRY1Q16526 586 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 NDUFAF6Q330K2 333 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 KRT77Q7Z794 578 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ZBTB44Q8NCP5 570 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 HBEGFQ99075 208 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 QPCTLQ9NXS2 382 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 UBQLN2Q9UHD9 624 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 NPEPPSL1A6NEC2 478 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 BTBD19C9JJ37 291 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 BCAS2O75934 225 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SLC2A2P11168 524 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 G0S2P27469 103 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ALDH7A1P49419 539 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 POLR2JP52435 117 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 HNRNPFP52597 415 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF235Q14590 738 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FBXO39Q8N4B4 442 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 METTL6Q8TCB7 284 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CELF1Q92879 486 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SMOXQ9NWM0 555 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM59LQ9UK28 342 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RAP2CQ9Y3L5 183 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 EPHX2P34913 555 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CASP3P42574 277 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ALDH9A1P49189 494 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM132CQ8N3T6 1108 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 PGLYRP2Q96PD5 576 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 C2orf49Q9BVC5 232 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM109Q9BVC6 243 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ASPNQ9BXN1 380 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 PRPF19Q9UMS4 504 aaKnown RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CAPNS1P04632 268 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RAB12Q6IQ22 244 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 OXR1Q8N573 874 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 OR9I1Q8NGQ6 314 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 TTC24A2A3L6 582 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SLCO1B7G3V0H7 640 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 MITFO75030 526 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-214ENST00000620676 IL18RAPO95256 599 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 ATF6P18850 670 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 CDC42P60953 191 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 SULT2A1Q06520 285 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 FAM182BQ5T319 152 aa5.01□□□□□ -1.61
VPS13D-214ENST00000620676 RNASEH2BQ5TBB1 312 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms