RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SEMA6CQ9H3T2 930 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 ZFYVE1Q9HBF4 777 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 RDH14Q9HBH5 336 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 ARFGAP3Q9NP61 516 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 ZNHIT2Q9UHR6 403 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 ZNF711Q9Y462 761 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 LOXL2Q9Y4K0 774 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 A0A0A6YYK5 440 aaPredicted RBP17.02■□□□□ 0.32
HMGN3-203ENST00000620514 RGSL1A5PLK6 1076 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 RCCD1A6NED2 376 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 F5H423 210 aaPredicted RBP17.02■□□□□ 0.32
HMGN3-203ENST00000620514 TMX2-CTNND1H3BSU7 103 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 PPM1DO15297 605 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 PMPCBO75439 489 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 EML2O95834 649 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 ITGA2BP08514 1039 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 CYLC1P35663 651 aaPredicted RBP17.02■□□□□ 0.32
HMGN3-203ENST00000620514 NR2C2P49116 596 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 MAP9Q49MG5 647 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 TFDP3Q5H9I0 405 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 ZNF648Q5T619 568 aaPredicted RBP17.02■□□□□ 0.32
HMGN3-203ENST00000620514 C11orf63Q6NUN7 778 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 USP53Q70EK8 1073 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 TMC3Q7Z5M5 1100 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 ZC3H18Q86VM9 953 aaKnown RBP17.02■□□□□ 0.32
HMGN3-203ENST00000620514 SLITRK4Q8IW52 837 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 GPR26Q8NDV2 337 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 NUDT22Q9BRQ3 303 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 CPNE5Q9HCH3 593 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 VPS18Q9P253 973 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 PISDQ9UG56 409 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 SPO11Q9Y5K1 396 aa17.02■□□□□ 0.32
HMGN3-203ENST00000620514 AURKAO14965 403 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 ZRANB2O95218 330 aaKnown RBP eCLIP17.01■□□□□ 0.31
HMGN3-203ENST00000620514 ITIH1P19827 911 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 NFKB1P19838 968 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 MLLT3P42568 568 aaPredicted RBP17.01■□□□□ 0.31
HMGN3-203ENST00000620514 EIF3IQ13347 325 aaKnown RBP17.01■□□□□ 0.31
HMGN3-203ENST00000620514 BIRC2Q13490 618 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 NR1D2Q14995 579 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 NOMO1Q15155 1222 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 SLC14A2Q15849 920 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 PHF19Q5T6S3 580 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 NKAIN2Q5VXU1 208 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 BZW1Q7L1Q6 419 aaKnown RBP17.01■□□□□ 0.31
HMGN3-203ENST00000620514 CHST15Q7LFX5 561 aaPredicted RBP17.01■□□□□ 0.31
HMGN3-203ENST00000620514 JAMLQ86YT9 394 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 CCDC50Q8IVM0 306 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 RCOR2Q8IZ40 523 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 P3H4Q92791 437 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 MRFAP1L1Q96HT8 127 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 PANX2Q96RD6 677 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 SPATA16Q9BXB7 569 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 HEMGNQ9BXL5 484 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 DPH1Q9BZG8 443 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 GPR63Q9BZJ6 419 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 MAGEE1Q9HCI5 957 aa17.01■□□□□ 0.31
HMGN3-203ENST00000620514 REXO2Q9Y3B8 237 aaKnown RBP17.01■□□□□ 0.31
HMGN3-203ENST00000620514 EPN1Q9Y6I3 576 aaPredicted RBP17.01■□□□□ 0.31
HMGN3-203ENST00000620514 LOC400499M0QZD8 3231 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 NDUFA10O95299 355 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 CPNE6O95741 557 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 NDST3O95803 873 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 ACP5P13686 325 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 FECHP22830 423 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 CD1CP29017 333 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 SLC5A2P31639 672 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 ETV5P41161 510 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 PEX6Q13608 980 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 LRP8Q14114 963 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 C16orf72Q14CZ0 275 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 BROXQ5VW32 411 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 KDELC1Q6UW63 502 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 RAD9BQ6WBX8 426 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 ZNF574Q6ZN55 896 aaPredicted RBP17■□□□□ 0.31
HMGN3-203ENST00000620514 GPR155Q7Z3F1 870 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 DAAM2Q86T65 1068 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 PIM3Q86V86 326 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 GAS2L3Q86XJ1 694 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 ZNF761Q86XN6 746 aaPredicted RBP17■□□□□ 0.31
HMGN3-203ENST00000620514 QKIQ96PU8 341 aaKnown RBP eCLIP17■□□□□ 0.31
HMGN3-203ENST00000620514 UBL7Q96S82 380 aaPredicted RBP17■□□□□ 0.31
HMGN3-203ENST00000620514 HERPUD2Q9BSE4 406 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 C10orf88Q9H8K7 445 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 ATXN10Q9UBB4 475 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 KCNK6Q9Y257 313 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 DUSP10Q9Y6W6 482 aa17■□□□□ 0.31
HMGN3-203ENST00000620514 ZFC3H1O60293 1989 aaKnown RBP16.99■□□□□ 0.31
HMGN3-203ENST00000620514 SCN8AQ9UQD0 1980 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 JMJD7P0C870 316 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 ZNF8P17098 575 aaPredicted RBP16.99■□□□□ 0.31
HMGN3-203ENST00000620514 BPIP17213 487 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 GPR3P46089 330 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 WNT3AP56704 352 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 TMPRSS3P57727 454 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 CLN3Q13286 438 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 COL9A2Q14055 689 aaPredicted RBP16.99■□□□□ 0.31
HMGN3-203ENST00000620514 ZNF569Q5MCW4 686 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 ARHGAP40Q5TG30 622 aa16.99■□□□□ 0.31
HMGN3-203ENST00000620514 CCDC70Q6NSX1 233 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms