RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SNX6Q9UNH7 406 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ANKDD1BA6NHY2 528 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 OR4Q2P0C623 313 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF280AP59817 542 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SKP1P63208 163 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 TIGD2Q4W5G0 525 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 PAGE2BQ5JRK9 111 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SLC9A4Q6AI14 798 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 STARD8Q92502 1023 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 RNFT2Q96EX2 444 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 C12orf42Q96LP6 360 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 S100A13Q99584 98 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 OXCT2Q9BYC2 517 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 DNAJB4Q9UDY4 337 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 GMPPBQ9Y5P6 360 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 TREHO43280 583 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 LPOP22079 712 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 GALK1P51570 392 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 THOP1P52888 689 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SLC5A3P53794 718 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MAP2K5Q13163 448 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 CFAP52Q8N1V2 620 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 CPSF7Q8N684 471 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ENDOVQ8N8Q3 282 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 OR7A2PQ8NGA2 310 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 PROX1Q92786 737 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF558Q96NG5 402 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 OLFM1Q99784 485 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 TIMMDC1Q9NPL8 285 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 OXSMQ9NWU1 459 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 AGO1Q9UL18 857 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 STYXL1Q9Y6J8 313 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MYH1P12882 1939 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 LRRC14BA6NHZ5 514 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 C9JVG2 144 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SMPD1P17405 629 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 DAOAP59103 153 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 PRKG2Q13237 762 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 LPIN1Q14693 890 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 TRIQKQ629K1 86 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ARHGAP36Q6ZRI8 547 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 TBC1D21Q8IYX1 336 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 REXO5Q96IC2 774 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 COQ10BQ9H8M1 238 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MINDY3Q9H8M7 445 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 COQ6Q9Y2Z9 468 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 TIMM22Q9Y584 194 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 H3BN98 237 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SCAMP3O14828 347 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MYL12BO14950 172 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SLC22A2O15244 555 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 KLHL18O94889 574 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 TOP3BO95985 862 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 PGK1P00558 417 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MYL12AP19105 171 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 PAICSP22234 425 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MOGSQ13724 837 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 NOMO2Q5JPE7 1267 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MBLAC2Q68D91 279 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF57Q68EA5 555 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 RALGPS2Q86X27 583 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 PARP8Q8N3A8 854 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 RERGQ96A58 199 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 HMCESQ96FZ2 354 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 NOL6Q9H6R4 1146 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ASAH2Q9NR71 780 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 FADS3Q9Y5Q0 445 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ULK1O75385 1050 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 MTHFRP42898 656 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ZNHIT3Q15649 155 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PDZK1Q5T2W1 519 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 FAM20CQ8IXL6 584 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GMIPQ9P107 970 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CNOT6Q9ULM6 557 aaKnown RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ARIH1Q9Y4X5 557 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 KLRG2A4D1S0 409 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF37AP17032 561 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 CRATP43155 626 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF132P52740 706 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 LILRA4P59901 499 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 SPRED3Q2MJR0 410 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 GPAT3Q53EU6 434 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 FBXO48Q5FWF7 155 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 TSTD2Q5T7W7 516 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 SYPL2Q5VXT5 272 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 OLFML1Q6UWY5 402 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PQLC3Q8N755 202 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF540Q8NDQ6 660 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 EMID1Q96A84 441 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ABCG8Q9H221 673 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 C1orf21Q9H246 121 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 KLF15Q9UIH9 416 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 C3orf18Q9UK00 162 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PIPSLA2A3N6 862 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 PPEF2O14830 753 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 TRMUO75648 421 aaKnown RBP8.31□□□□□ -1.08
ALMS1-208ENST00000620466 FESP07332 822 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 TSPAN19P0C672 248 aa8.31□□□□□ -1.08
ALMS1-208ENST00000620466 ADSLP30566 484 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms