RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 C16orf96A6NNT2 1141 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.04
UBXN1-218ENST00000616865 FPGTO14772 594 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 AQP9O43315 295 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 NDST3O95803 873 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 CALCOCO2Q13137 446 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 PDE1CQ14123 709 aaPredicted RBP14.83□□□□□ -0.04
UBXN1-218ENST00000616865 SPARCL1Q14515 664 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 CDKN3Q16667 212 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 TPRG1LQ5T0D9 272 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 TEX35Q5T0J7 233 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 IZUMO3Q5VZ72 239 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 GUSBP11Q6P575 273 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 KDELC1Q6UW63 502 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 EFL1Q7Z2Z2 1120 aaKnown RBP14.83□□□□□ -0.04
UBXN1-218ENST00000616865 LINC00523Q86TU6 105 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 SLC25A41Q8N5S1 370 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 BBOF1Q8ND07 529 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 HCAR2Q8TDS4 363 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 SNRNP27Q8WVK2 155 aaKnown RBP14.83□□□□□ -0.04
UBXN1-218ENST00000616865 GRAMD1AQ96CP6 724 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 SNF8Q96H20 258 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 ERP44Q9BS26 406 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 MLPHQ9BV36 600 aaPredicted RBP14.83□□□□□ -0.04
UBXN1-218ENST00000616865 TDRD1Q9BXT4 1180 aaKnown RBP14.83□□□□□ -0.04
UBXN1-218ENST00000616865 DPH5Q9H2P9 285 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 DKK3Q9UBP4 350 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 KLF15Q9UIH9 416 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 NEU2Q9Y3R4 380 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 ZNF462Q96JM2 2506 aa14.83□□□□□ -0.04
UBXN1-218ENST00000616865 ANKRD36A6QL64 1941 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 EME2A4GXA9 379 aaPredicted RBP14.82□□□□□ -0.04
UBXN1-218ENST00000616865 J3QKU1 62 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 NEMP1O14524 444 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 DNALI1O14645 258 aaPredicted RBP14.82□□□□□ -0.04
UBXN1-218ENST00000616865 SPINT1O43278 529 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 HTRA2O43464 458 aaPredicted RBP14.82□□□□□ -0.04
UBXN1-218ENST00000616865 HEXIM1O94992 359 aaKnown RBP14.82□□□□□ -0.04
UBXN1-218ENST00000616865 PGLSO95336 258 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 AP2A1O95782 977 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 AGTP01019 485 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 JUNDP17535 347 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 ABL2P42684 1182 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 RPL26P61254 145 aaKnown RBP14.82□□□□□ -0.04
UBXN1-218ENST00000616865 TUBB4BP68371 445 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 CDK16Q00536 496 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 SLC7A5Q01650 507 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 GALNT3Q14435 633 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 DEFB133Q30KQ1 61 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 ERAP2Q6P179 960 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 USP45Q70EL2 814 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 PPIL6Q8IXY8 311 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 DNAAF3Q8N9W5 541 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 DENND6BQ8NEG7 585 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 TTC9Q92623 222 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 TADA1Q96BN2 335 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 ATXN7L3BQ96GX2 97 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 MRGPRX2Q96LB1 330 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 NSMCE3Q96MG7 304 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 LENG8Q96PV6 779 aaPredicted RBP14.82□□□□□ -0.04
UBXN1-218ENST00000616865 APOL2Q9BQE5 337 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 SEMA4CQ9C0C4 833 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 EIF2B3Q9NR50 452 aaKnown RBP14.82□□□□□ -0.04
UBXN1-218ENST00000616865 ANAPC5Q9UJX4 755 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 PHTF1Q9UMS5 762 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 RPL26L1Q9UNX3 145 aaKnown RBP14.82□□□□□ -0.04
UBXN1-218ENST00000616865 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 SNX24Q9Y343 169 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 ENTPD2Q9Y5L3 495 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 TENM4Q6N022 2769 aa14.82□□□□□ -0.04
UBXN1-218ENST00000616865 CPED1A4D0V7 1026 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 TRAFD1O14545 582 aaPredicted RBP14.81□□□□□ -0.04
UBXN1-218ENST00000616865 TPP1O14773 563 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 TSPAN6O43657 245 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 EPOP01588 193 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 FGF1P05230 155 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 RHOXF2BP0C7M4 288 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 HLA-DPA1P20036 260 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 TPSB2P20231 275 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 RBMS1P29558 406 aaKnown RBP14.81□□□□□ -0.04
UBXN1-218ENST00000616865 SUOXP51687 545 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 PFN3P60673 137 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 GUCY2DQ02846 1103 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 VAC14Q08AM6 782 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 EIF2B5Q13144 721 aaKnown RBP14.81□□□□□ -0.04
UBXN1-218ENST00000616865 SGCGQ13326 291 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 NR0B2Q15466 257 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 TPSAB1Q15661 275 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 CRTC1Q6UUV9 634 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 RBM44Q6ZP01 1051 aaKnown RBP14.81□□□□□ -0.04
UBXN1-218ENST00000616865 RBFAQ8N0V3 343 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 LMX1AQ8TE12 382 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 BTN2A2Q8WVV5 523 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 RAB7BQ96AH8 199 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 ECHDC3Q96DC8 303 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 GORASP1Q9BQQ3 440 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 RHOXF2Q9BQY4 288 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 C1QTNF2Q9BXJ5 285 aa14.81□□□□□ -0.04
UBXN1-218ENST00000616865 RRAGDQ9NQL2 400 aaPredicted RBP14.81□□□□□ -0.04
UBXN1-218ENST00000616865 GGT7Q9UJ14 662 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms