RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 PRDM8Q9NQV8 689 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 OCIAD1Q9NX40 245 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 FBN2P35556 2912 aa17.57■□□□□ 0.4
TRAPPC3-209ENST00000616395 CCDC151A5D8V7 595 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 EFCAB7A8K855 629 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 RHPN2P1A8MT19 583 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 TJP3O95049 919 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 F9P00740 461 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 MPSTP25325 297 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 CSTF2P33240 577 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 DCTP40126 519 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 LIMK2P53671 638 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 HDAC4P56524 1084 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 OGDHQ02218 1023 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 DHX34Q14147 1143 aaKnown RBP17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 CLPPQ16740 277 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 TMEM52BQ4KMG9 183 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 DCAF12Q5T6F0 453 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 ANKS6Q68DC2 871 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 WDR93Q6P2C0 686 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 C16orf46Q6P387 395 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 ZNF438Q7Z4V0 828 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 HEATR4Q86WZ0 1026 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 SLC13A5Q86YT5 568 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 NRSN1Q8IZ57 195 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 NLGN4XQ8N0W4 816 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 NLGN4YQ8NFZ3 816 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 OR56A4Q8NGH8 313 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 GRK7Q8WTQ7 553 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 ALG3Q92685 438 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 KRT35Q92764 455 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 ZYG11BQ9C0D3 744 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 RAB17Q9H0T7 212 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 ARFGAP3Q9NP61 516 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 CACNA1DQ01668 2161 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 CRYBG3Q68DQ2 2970 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 CHD5Q8TDI0 1954 aa17.56■□□□□ 0.4
TRAPPC3-209ENST00000616395 GJC1P36383 396 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 PTPN9P43378 593 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 RIPPLY3P57055 190 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 TRA2AQ13595 282 aaKnown RBP eCLIP17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 NR1D2Q14995 579 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 BOLA3Q53S33 107 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 NKAIN2Q5VXU1 208 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 ASB18Q6ZVZ8 466 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 FAM129CQ86XR2 697 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 EFCAB3Q8N7B9 438 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 NOA1Q8NC60 698 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 PLA2G15Q8NCC3 412 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 LRRN4CLQ8ND94 238 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 STARD8Q92502 1023 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 KRT12Q99456 494 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 EFHD1Q9BUP0 239 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 PARD6BQ9BYG5 372 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 SPRY4Q9C004 299 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 TRIM7Q9C029 511 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 SPATS2LQ9NUQ6 558 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 CUEDC1Q9NWM3 386 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 UTP11Q9Y3A2 253 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 KCNMB2Q9Y691 235 aa17.55■□□□□ 0.4
TRAPPC3-209ENST00000616395 CXorf51AA0A1B0GTR3 108 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 FAM187AA6NFU0 413 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 PHF2O75151 1096 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 PYGMP11217 842 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 MAP4P27816 1152 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 TNFRSF8P28908 595 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 MTM1Q13496 603 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 TCTN3Q6NUS6 607 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 TIPARPQ7Z3E1 657 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 C17orf82Q86X59 251 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 TICAM1Q8IUC6 712 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 KLHL7Q8IXQ5 586 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 TTC13Q8NBP0 860 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 OR4D9Q8NGE8 314 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 FUBP1Q96AE4 644 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 MAK16Q9BXY0 300 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 FRMD8P1Q9BZ68 369 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 TMEM9Q9P0T7 183 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 DKK3Q9UBP4 350 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 EFR3BQ9Y2G0 817 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 ABCA12Q86UK0 2595 aa17.54■□□□□ 0.4
TRAPPC3-209ENST00000616395 TTLL8A6PVC2 850 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 B4E171 279 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 FAM72CH0Y354 149 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 MKRN2OSH3BPM6 223 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 THRAP10827 490 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 TCN2P20062 427 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 XPAP23025 273 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 CSF2RBP32927 897 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 PTPN7P35236 360 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 TSPAN7P41732 249 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 FNTAP49354 379 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 GEMIN4P57678 1058 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 RAB15P59190 212 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 MC1RQ01726 317 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 ELP6Q0PNE2 266 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 PDK2Q15119 407 aa17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 ACBD5Q5T8D3 534 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC3-209ENST00000616395 FAM72AQ5TYM5 149 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms