RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 MMP28Q9H239 520 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 SNTG1Q9NSN8 517 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 DNAJC11Q9NVH1 559 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 OXSMQ9NWU1 459 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 ADAM30Q9UKF2 790 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 MKLN1Q9UL63 735 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 PCDHAC2Q9Y5I4 1007 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 MEIS2O14770 477 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 SLC22A2O15244 555 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 HTR1BP28222 390 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 CTSKP43235 329 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 GSK3BP49841 420 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 OGDHQ02218 1023 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 AKIRIN2Q53H80 203 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 NAPRTQ6XQN6 538 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 BBS7Q8IWZ6 715 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 LRRC71Q8N4P6 559 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 LSMEM1Q8N8F7 131 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 RHOXF1Q8NHV9 184 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 REXO5Q96IC2 774 aaKnown RBP13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 SORT1Q99523 831 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 CNPPD1Q9BV87 410 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 RACGAP1Q9H0H5 632 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 PPIL3Q9H2H8 161 aaKnown RBP13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 GPN2Q9H9Y4 310 aaPredicted RBP13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 PLCL2Q9UPR0 1127 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 PCDHA10Q9Y5I2 948 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 ATRNL1Q5VV63 1379 aa13.5□□□□□ -0.25
PPP4R3B-205ENST00000616288 MON2Q7Z3U7 1717 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 SSNA1O43805 119 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 TNNI3P19429 210 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 AGXTP21549 392 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 BDNFP23560 247 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 LIMK2P53671 638 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 DEFA5Q01523 94 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ZNF45Q02386 682 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 PFKFB4Q16877 469 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 CLVS2Q5SYC1 327 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ZNF438Q7Z4V0 828 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 TPD52L3Q96J77 140 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ZNF778Q96MU6 729 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 RIT2Q99578 217 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 SLC30A2Q9BRI3 323 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 SNRNP25Q9BV90 132 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 VRTNQ9H8Y1 702 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 KRT84Q9NSB2 600 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 GMPR2Q9P2T1 348 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 DNTTP04053 509 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 UMPSP11172 480 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ACO1P21399 889 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 CXCR2P25025 360 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ATN1P54259 1190 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 LAPTM4AQ15012 233 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 CERCAMQ5T4B2 595 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 TMEM179Q6ZVK1 233 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 METTL4Q8N3J2 472 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ROPN1LQ96C74 230 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 C19orf60Q96EN9 201 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 FEM1CQ96JP0 617 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 CPXM1Q96SM3 734 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 TNKS2Q9H2K2 1166 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ZMAT5Q9UDW3 170 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 LOC100130705A0A1B0GUX0 176 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 POLR1CO15160 346 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 FOSL1P15407 271 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 ERP29P30040 261 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 EVI2BP34910 448 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 RFX4Q33E94 735 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 SLC36A3Q495N2 470 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 FBXO48Q5FWF7 155 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 DDI2Q5TDH0 399 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 FAM205BPQ63HN1 556 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 CPSF7Q8N684 471 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 EGFL8Q99944 293 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 TTYH1Q9H313 450 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 GIMAP2Q9UG22 337 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 CLCA3PQ9Y6N3 262 aa13.49□□□□□ -0.25
PPP4R3B-205ENST00000616288 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 BBIP1A8MTZ0 92 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 PRAMEF10O60809 474 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 DGAT1O75907 488 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 POLR2CP19387 275 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 POU4F1Q01851 419 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 TCEAL1Q15170 157 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SCUBE3Q8IX30 993 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 RPL3LQ92901 407 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 SLC45A3Q96JT2 553 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 DHRS4Q9BTZ2 278 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 RTFDC1Q9BY42 306 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 MAU2Q9Y6X3 613 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 FABP12A6NFH5 140 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 NDST3O95803 873 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 IL6P05231 212 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 DDCP20711 480 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 RPA4Q13156 261 aa13.48□□□□□ -0.25
PPP4R3B-205ENST00000616288 MAB21L1Q13394 359 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms