RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 INTS8Q75QN2 995 aaKnown RBP5.06□□□□□ -1.6
RFC3-203ENST00000616236 DPPA4Q7L190 304 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 CYB5R4Q7L1T6 521 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 KCTD9Q7L273 389 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 LINGO2Q7L985 606 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 SLC29A4Q7RTT9 530 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 SERPINA11Q86U17 422 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 IGFN1Q86VF2 1251 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 RASAL3Q86YV0 1011 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 TMC8Q8IU68 726 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 RTL3Q8N8U3 475 aaKnown RBP5.06□□□□□ -1.6
RFC3-203ENST00000616236 DBF4BQ8NFT6 615 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 BEST2Q8NFU1 509 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 OCC1Q8TAD7 63 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 BCAS4Q8TDM0 211 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 ZFAND2BQ8WV99 257 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 TEKT1Q969V4 418 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 RMDN2Q96LZ7 410 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 C16orf45Q96MC5 204 aaPredicted RBP5.06□□□□□ -1.6
RFC3-203ENST00000616236 TM2D2Q9BX73 214 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 CDT1Q9H211 546 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 FZD8Q9H461 694 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 LIN28AQ9H9Z2 209 aaKnown RBP5.06□□□□□ -1.6
RFC3-203ENST00000616236 IARS2Q9NSE4 1012 aaKnown RBP5.06□□□□□ -1.6
RFC3-203ENST00000616236 PRMT7Q9NVM4 692 aaPredicted RBP5.06□□□□□ -1.6
RFC3-203ENST00000616236 AURKAIP1Q9NWT8 199 aaPredicted RBP5.06□□□□□ -1.6
RFC3-203ENST00000616236 IL19Q9UHD0 177 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 SLC24A2Q9UI40 661 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 APPL1Q9UKG1 709 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 TRIM17Q9Y577 477 aa5.06□□□□□ -1.6
RFC3-203ENST00000616236 TRBV5-7A0A0A0MS05 114 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 PLOD2O00469 737 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 SMAD9O15198 467 aaKnown RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 CREG1O75629 220 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 VIMP08670 466 aaKnown RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 UROSP10746 265 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 BMP5P22003 454 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 GPTP24298 496 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 CDC25CP30307 473 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 KHKP50053 298 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 TPD52P55327 224 aaPredicted RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 SNU13P55769 128 aaKnown RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 UBASH3AP57075 661 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 ARF5P84085 180 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 HOXA4Q00056 320 aaPredicted RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 PMPCAQ10713 525 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 SREBF2Q12772 1141 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 ICAM4Q14773 271 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 SMN1Q16637 294 aaKnown RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 MYLK3Q32MK0 819 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 TOR1AIP1Q5JTV8 583 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 KCNT1Q5JUK3 1230 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 SHEQ5VZ18 495 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 C11orf57Q6ZUT1 292 aaPredicted RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 SLC44A3Q8N4M1 653 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 AFAP1Q8N556 730 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 ANKRD20A12PQ8NF67 263 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 OR7G3Q8NG95 312 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 ST7LQ8TDW4 575 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 DENND1AQ8TEH3 1009 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 ROBO4Q8WZ75 1007 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 SPSB1Q96BD6 273 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 MSI2Q96DH6 328 aaKnown RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 ZNF570Q96NI8 536 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 DDOQ99489 341 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 HNRNPABQ99729 332 aaKnown RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 INPP5KQ9BT40 448 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 KRT23Q9C075 422 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 TASP1Q9H6P5 420 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 MVB12BQ9H7P6 319 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 CHMP1AQ9HD42 196 aaPredicted RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 GPR108Q9NPR9 543 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 ERAP1Q9NZ08 941 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 NINJ2Q9NZG7 142 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 IPO11Q9UI26 975 aaKnown RBP5.05□□□□□ -1.6
RFC3-203ENST00000616236 FZD1Q9UP38 647 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 WNT6Q9Y6F9 365 aa5.05□□□□□ -1.6
RFC3-203ENST00000616236 SYCE3A1L190 88 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 C17orf102A2RUQ5 167 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 RGSL1A5PLK6 1076 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 TMEM202A6NGA9 273 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 TRIM77I1YAP6 450 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 NDC80O14777 642 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 SLC30A4O14863 429 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 EIF3DO15371 548 aaKnown RBP eCLIP5.04□□□□□ -1.6
RFC3-203ENST00000616236 SOCS5O75159 536 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 MOSPD3O75425 235 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 RGS11O94810 467 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 TOMM70O94826 608 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 GH2P01242 217 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 LCKP06239 509 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 AZGP1P25311 298 aaKnown RBP5.04□□□□□ -1.6
RFC3-203ENST00000616236 HOXA7P31268 230 aaPredicted RBP5.04□□□□□ -1.6
RFC3-203ENST00000616236 SOAT1P35610 550 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 GPC3P51654 580 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 LUMP51884 338 aaPredicted RBP5.04□□□□□ -1.6
RFC3-203ENST00000616236 LIMK1P53667 647 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 KIAA1024LP59773 190 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 ST8SIA6P61647 398 aa5.04□□□□□ -1.6
RFC3-203ENST00000616236 KLHL30Q0D2K2 578 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms