RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 A0A087X1B8 175 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ENTPD5O75356 428 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 DNAJC8O75937 253 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 IPO13O94829 963 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 SORBS2O94875 1100 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 LATS1O95835 1130 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CYP17A1P05093 508 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PKMP14618 531 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 CD1DP15813 335 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ZNF37AP17032 561 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 LHCGRP22888 699 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ATP5F1P24539 256 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 MSX2P35548 267 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 DGKGP49619 791 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ATXN3P54252 364 aaPredicted RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 AP1S1P61966 158 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 XIAPP98170 497 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ACVR1Q04771 509 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ZNF77Q15935 545 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PPP1R3AQ16821 1122 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CARD16Q5EG05 197 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PRSS36Q5K4E3 855 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CTSL3PQ5NE16 218 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TANGO2Q6ICL3 276 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 Q6ZVL8 140 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 PIWIL4Q7Z3Z4 852 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 FAM217AQ8IXS0 508 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 OR2A12Q8NGT7 310 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 GIMAP7Q8NHV1 300 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 ZNF398Q8TD17 642 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 NXPE3Q969Y0 559 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 LINGO1Q96FE5 620 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 UBXN10Q96LJ8 280 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 CDK15Q96Q40 435 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 RPP25Q9BUL9 199 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 WRAP53Q9BUR4 548 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 DRC3Q9H069 523 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 BRD9Q9H8M2 597 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.42□□□□□ -1.86
LIG4-205ENST00000614526 TAS2R1Q9NYW7 299 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 B4GALT6Q9UBX8 382 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TRMT6Q9UJA5 497 aaKnown RBP3.42□□□□□ -1.86
LIG4-205ENST00000614526 LZTS1Q9Y250 596 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 COQ6Q9Y2Z9 468 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 TIMM22Q9Y584 194 aa3.42□□□□□ -1.86
LIG4-205ENST00000614526 GOLGA4Q13439 2230 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 LTBP2Q14767 1821 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 GLYATL1P3A0A0U1RQE8 302 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CCDC189A1A4V9 331 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TBC1D3BA6NDS4 549 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 HEPACAM2A8MVW5 462 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PRRT4C9JH25 899 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 UBFD1O14562 309 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 ZNF195O14628 629 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 INPP4BO15327 924 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TULP3O75386 442 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RASSF9O75901 435 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SLC25A14O95258 325 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 FDXRP22570 491 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 XPAP23025 273 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 PRDX3P30048 256 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 HMGCLP35914 325 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 NNMTP40261 264 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 GDF5P43026 501 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SOX9P48436 509 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CSRP3P50461 194 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 FOXA1P55317 472 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PTSQ03393 145 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TUBB3Q13509 450 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ACAP2Q15057 778 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 DBN1Q16643 649 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TSNAXIP1Q2TAA8 658 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 LSM12Q3MHD2 195 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 ATP13A5Q4VNC0 1218 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SEL1L3Q68CR1 1132 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ZNF783Q6ZMS7 281 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 FAM43BQ6ZT52 329 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 NPAS3Q8IXF0 933 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PARP9Q8IXQ6 854 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 BEND7Q8N7W2 519 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 HIPK4Q8NE63 616 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 MCUR1Q96AQ8 359 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 KXD1Q9BQD3 176 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TACO1Q9BSH4 297 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 THTPAQ9BU02 230 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 HTATIP2Q9BUP3 242 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CADM1Q9BY67 442 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 CLPBQ9H078 707 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 FBRSL1Q9HCM7 1045 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 PRM3Q9NNZ6 103 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 MID1IP1Q9NPA3 183 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TCF7L2Q9NQB0 619 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SAR1AQ9NR31 198 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PLA2G4CQ9UP65 541 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ERVW-1Q9UQF0 538 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 BTRCQ9Y297 605 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ASB1Q9Y576 335 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TRIOBPQ9H2D6 2365 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 KIAA1671Q9BY89 1806 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms