RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	PRAMEF11	O60813	436 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	TMCC1	O94876	653 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	TNFAIP8	O95379	198 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	JUN	P05412	331 aa	Known RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	RBP1	P09455	135 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	ZXDB	P98169	803 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	MPPE1	Q53F39	396 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	HECTD2	Q5U5R9	776 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	FBXL19	Q6PCT2	694 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	B3GNT6	Q6ZMB0	384 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	ADGRD2	Q7Z7M1	963 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	SATL1	Q86VE3	508 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	CILP2	Q8IUL8	1156 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	PGBD5	Q8N414	524 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	EFCAB3	Q8N7B9	438 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	KY	Q8NBH2	561 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	SH3RF2	Q8TEC5	729 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	SMG7	Q92540	1137 aa	Known RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	LRGUK	Q96M69	825 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	ZNF599	Q96NL3	588 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	CATSPER2	Q96P56	530 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	TDP1	Q9NUW8	608 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	PADI4	Q9UM07	663 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	MIA3	Q5JRA6	1907 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	LOC285095	A0A1B0GVY8	99 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	TTC24	A2A3L6	582 aa	Predicted RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	CLPTM1	O96005	669 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	ASL	P04424	464 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	POU2F2	P09086	479 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	ATXN1L	P0C7T5	689 aa	Known RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	CD1E	P15812	388 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	NUDT2	P50583	147 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	SGSH	P51688	502 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	ADGRE1	Q14246	886 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	RNF219	Q5W0B1	726 aa	Predicted RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	ZNF783	Q6ZMS7	281 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	BBS7	Q8IWZ6	715 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	OR7D4	Q8NG98	312 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	BHMT	Q93088	406 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	MAEL	Q96JY0	434 aa	Known RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	SMG9	Q9H0W8	520 aa	Known RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	THEG	Q9P2T0	379 aa		13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.84	□□□□□ -0.19
COPS7B-223	ENST00000611614	TTC36	A6NLP5	189 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	CBX4	O00257	560 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	GREM1	O60565	184 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	CCDC166	P0CW27	439 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	ACAP2	Q15057	778 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	TLR1	Q15399	786 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	TMEM198	Q66K66	360 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	RNF135	Q8IUD6	432 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	CPXM2	Q8N436	756 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	OR6P1	Q8NGX9	317 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	HDAC10	Q969S8	669 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	FAR2	Q96K12	515 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	UBXN10	Q96LJ8	280 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	FAM210A	Q96ND0	272 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	CDCA3	Q99618	268 aa	Predicted RBP	13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	POLR1E	Q9GZS1	481 aa	Known RBP	13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	GTSE1	Q9NYZ3	720 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	UBA2	Q9UBT2	640 aa	Predicted RBP	13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	CIDEB	Q9UHD4	219 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	VWA7	Q9Y334	891 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	NEMP2	A6NFY4	417 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	CAPN8	A6NHC0	703 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614		A8MT66	165 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	TMEM233	B4DJY2	109 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	SDHD	O14521	159 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	KDELR3	O43731	214 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	DNAJA2	O60884	412 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	IPO13	O94829	963 aa	Known RBP	13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	S1PR4	O95977	384 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	ETS2	P15036	469 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	PML	P29590	882 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	ARSD	P51689	593 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	PRAME	P78395	509 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	CREB5	Q02930	508 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	DUSP6	Q16828	381 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	BORA	Q6PGQ7	559 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	FAM217A	Q8IXS0	508 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	DSEL	Q8IZU8	1212 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	HIPK4	Q8NE63	616 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	SFXN1	Q9H9B4	322 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	EML4	Q9HC35	981 aa	Known RBP	13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	ZBTB26	Q9HCK0	441 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	SEPT3	Q9UH03	358 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	DMTF1	Q9Y222	760 aa		13.83	□□□□□ -0.2
COPS7B-223	ENST00000611614	ARHGAP10	A1A4S6	786 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	LDB2	O43679	373 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	CAPNS1	P04632	268 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	SLC26A3	P40879	764 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	NTHL1	P78549	312 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	ILF2	Q12905	390 aa	Known RBP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	RFTN1	Q14699	578 aa	Predicted RBP	13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	MPP7	Q5T2T1	576 aa		13.82	□□□□□ -0.2
COPS7B-223	ENST00000611614	TMC5	Q6UXY8	1006 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 831 ms