RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 CCKBRP32239 447 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
LINC01278-206ENST00000610088 GPR1P46091 355 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 ARSEP51690 589 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 NAA30Q147X3 362 aaPredicted RBP12.88□□□□□ -0.35
LINC01278-206ENST00000610088 CNGA3Q16281 694 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 TMPRSS9Q7Z410 1059 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 FAM46DQ8NEK8 389 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 SCRN2Q96FV2 425 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 TSGA13Q96PP4 275 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
LINC01278-206ENST00000610088 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 DNPEPQ9ULA0 475 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 DGKBQ9Y6T7 804 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 UNC13CQ8NB66 2214 aa12.88□□□□□ -0.35
LINC01278-206ENST00000610088 TMEM202A6NGA9 273 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 NPIPB15A6NHN6 443 aaPredicted RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 ZNF891A8MT65 544 aaPredicted RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 B4DGG1 531 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 APOL1O14791 398 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 KRT1P04264 644 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 MYCLP1P12525 358 aaPredicted RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 ZFXP17010 805 aaPredicted RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 ETV3P41162 512 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 DSC2Q02487 901 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 GBE1Q04446 702 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 AP1B1Q10567 949 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 PEX6Q13608 980 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 ASTE1Q2TB18 679 aaPredicted RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 DEFB109BQ30KR1 87 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 TMEM164Q5U3C3 297 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 HSD11B1LQ7Z5J1 315 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 CPNE8Q86YQ8 564 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 RFX6Q8HWS3 928 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 KYQ8NBH2 561 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 KIAA1524Q8TCG1 905 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 OR1E3Q8WZA6 343 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 RAPGEF5Q92565 580 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 FATE1Q969F0 183 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 NKD1Q969G9 470 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 HDAC11Q96DB2 347 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 DTD2Q96FN9 168 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 PDXPQ96GD0 296 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 COQ10AQ96MF6 247 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 RNF157Q96PX1 679 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 RBM15Q96T37 977 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 CMKLR1Q99788 373 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 GSDMCQ9BYG8 508 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 DPEP2Q9H4A9 486 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 CARS2Q9HA77 564 aaKnown RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 MRPL40Q9NQ50 206 aaKnown RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 PRDM8Q9NQV8 689 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 INTUQ9ULD6 942 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 PNMA8BQ9ULN7 279 aaPredicted RBP12.87□□□□□ -0.35
LINC01278-206ENST00000610088 CHKBQ9Y259 395 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 FBN3Q75N90 2809 aa12.87□□□□□ -0.35
LINC01278-206ENST00000610088 A0A1W2PQM1 296 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 PRSS38A1L453 326 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 PPP1R12AO14974 1030 aaPredicted RBP12.86□□□□□ -0.35
LINC01278-206ENST00000610088 ZW10O43264 779 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 PYGLP06737 847 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 ZNF30P17039 623 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 TRIM23P36406 574 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 SLC1A1P43005 524 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 MAGEA1P43355 309 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 GNPDA1P46926 289 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01278-206ENST00000610088 SEPT6Q14141 434 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 PDK1Q15118 436 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 SPA17Q15506 151 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 LRRC66Q68CR7 880 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 Q6ZVL8 140 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 RHOT1Q8IXI2 618 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 Q8N9G6 341 aaPredicted RBP12.86□□□□□ -0.35
LINC01278-206ENST00000610088 LPCAT1Q8NF37 534 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 CPT1CQ8TCG5 803 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 PIH1D2Q8WWB5 315 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 MAML1Q92585 1016 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 FAF2Q96CS3 445 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 AP2M1Q96CW1 435 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 NSMCE3Q96MG7 304 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 ADGRE3Q9BY15 652 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 TMEM168Q9H0V1 697 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 LRRN3Q9H3W5 708 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 PCDH9Q9HC56 1237 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 FGF22Q9HCT0 170 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 CD84Q9UIB8 345 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 PDZD2O15018 2839 aa12.86□□□□□ -0.35
LINC01278-206ENST00000610088 A0A0J9YYE9 177 aa12.85□□□□□ -0.35
LINC01278-206ENST00000610088 K7EM74 188 aa12.85□□□□□ -0.35
LINC01278-206ENST00000610088 DUX1O43812 170 aa12.85□□□□□ -0.35
LINC01278-206ENST00000610088 IPO7O95373 1038 aaKnown RBP12.85□□□□□ -0.35
LINC01278-206ENST00000610088 JCHAINP01591 159 aa12.85□□□□□ -0.35
LINC01278-206ENST00000610088 TRBC1P01850 177 aa12.85□□□□□ -0.35
LINC01278-206ENST00000610088 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
LINC01278-206ENST00000610088 PDHA1P08559 390 aa12.85□□□□□ -0.35
LINC01278-206ENST00000610088 LHCGRP22888 699 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms