RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TMEM62Q0P6H9 643 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 TTC23Q5W5X9 447 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 GTF2IRD2BQ6EKJ0 949 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 THAP5Q7Z6K1 395 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 TFAP2DQ7Z6R9 452 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 GTF2IRD2Q86UP8 949 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 CPNE9Q8IYJ1 553 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 CHID1Q9BWS9 393 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 ING2Q9H160 280 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 ATAD3AQ9NVI7 634 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 DSEQ9UL01 958 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 PCDHB3Q9Y5E6 796 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 BRCA1P38398 1863 aaKnown RBP22.26■■□□□ 1.15
SHANK2-220ENST00000608988 MBLAC1A4D2B0 266 aaPredicted RBP22.26■■□□□ 1.15
SHANK2-220ENST00000608988 IRAK2O43187 625 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 MTHFD1P11586 935 aaKnown RBP22.26■■□□□ 1.15
SHANK2-220ENST00000608988 RENBPP51606 427 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 ARSFP54793 590 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 RPS3AP61247 264 aaKnown RBP22.26■■□□□ 1.15
SHANK2-220ENST00000608988 XAF1Q6GPH4 301 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 GALNT18Q6P9A2 607 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 SULF1Q8IWU6 871 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 RTL3Q8N8U3 475 aaKnown RBP22.26■■□□□ 1.15
SHANK2-220ENST00000608988 GTF3C2Q8WUA4 911 aaPredicted RBP22.26■■□□□ 1.15
SHANK2-220ENST00000608988 LRRC3Q9BY71 257 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 WDR12Q9GZL7 423 aaKnown RBP22.26■■□□□ 1.15
SHANK2-220ENST00000608988 TUBB1Q9H4B7 451 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 SPON1Q9HCB6 807 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 IPPQ9Y573 584 aa22.26■■□□□ 1.15
SHANK2-220ENST00000608988 MYBPHLA2RUH7 354 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 CCDC154A6NI56 674 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 KATNA1O75449 491 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 THRBP10828 461 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 EEF1B2P24534 225 aaKnown RBP22.25■■□□□ 1.15
SHANK2-220ENST00000608988 PCSK1P29120 753 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 CDH13P55290 713 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 ACVR1Q04771 509 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 EGFLAMQ63HQ2 1017 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 OTUD5Q96G74 571 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 NSMCE2Q96MF7 247 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 BEGAINQ9BUH8 593 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 KATNBL1Q9H079 304 aa22.25■■□□□ 1.15
SHANK2-220ENST00000608988 FAM234BA2RU67 622 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 H0Y858 1186 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 SLC22A3O75751 556 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 JAK1P23458 1154 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 POLR2IP36954 125 aaKnown RBP22.24■■□□□ 1.15
SHANK2-220ENST00000608988 ADCYAP1R1P41586 468 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 OCA2Q04671 838 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 ATP1A4Q13733 1029 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 C8orf59Q8N0T1 100 aaPredicted RBP22.24■■□□□ 1.15
SHANK2-220ENST00000608988 DPP10Q8N608 796 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 MUS81Q96NY9 551 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 ATOH8Q96SQ7 321 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 SIK2Q9H0K1 926 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 ATXN3LQ9H3M9 355 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 TLR9Q9NR96 1032 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.24■■□□□ 1.15
SHANK2-220ENST00000608988 SUN2Q9UH99 717 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 PAGE1O75459 146 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 CHEK2O96017 543 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 SLC2A3P11169 496 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 MTHFD2P13995 350 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 CRHBPP24387 322 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 CCR1P32246 355 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 HALP42357 657 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 MAGEA10P43363 369 aaPredicted RBP22.24■■□□□ 1.15
SHANK2-220ENST00000608988 PLCL1Q15111 1095 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 DUSP28Q4G0W2 176 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 RABL3Q5HYI8 236 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 HID1Q8IV36 788 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 SMG8Q8ND04 991 aaKnown RBP22.24■■□□□ 1.15
SHANK2-220ENST00000608988 OR6P1Q8NGX9 317 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 DNAJB14Q8TBM8 379 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 ABHD8Q96I13 439 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 C1QTNF3Q9BXJ4 246 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 MROQ9BYG7 248 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 ELP3Q9H9T3 547 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 HMG20AQ9NP66 347 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 TMEM30AQ9NV96 361 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 RIMKLBQ9ULI2 386 aa22.24■■□□□ 1.15
SHANK2-220ENST00000608988 ASPDHA6ND91 283 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 CLDN25C9JDP6 229 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 IFRD1O00458 451 aaPredicted RBP22.23■■□□□ 1.15
SHANK2-220ENST00000608988 PTGESO14684 152 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 KERAO60938 352 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 CRCPO75575 148 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 ALOX5P09917 674 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 LINC00032P0C843 101 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 RAP2AP10114 183 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 CHRM3P20309 590 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 HRH2P25021 359 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 ZFP36L2P47974 494 aaKnown RBP22.23■■□□□ 1.15
SHANK2-220ENST00000608988 CLCQ05315 142 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 PCSK7Q16549 785 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 TRIM16LQ309B1 348 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 MRNIPQ6NTE8 343 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 IGFN1Q86VF2 1251 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 S100ZQ8WXG8 99 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 KIAA1191Q96A73 305 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms