RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 UGT1A6P19224 532 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 UGT1A1P22309 533 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 UGT1A4P22310 534 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 GRK2P25098 689 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 UGT1A3P35503 534 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 UGT1A5P35504 534 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 IL12RB1P42701 662 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 ACAP2Q15057 778 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 POM121L1PQ3SYA9 428 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 ZCCHC23Q6ZST2 131 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 CSGALNACT1Q8TDX6 532 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 SREK1Q8WXA9 508 aaKnown RBP21.45■■□□□ 1.02
USP6NL-204ENST00000606752 FAM129BQ96TA1 746 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 P2RY12Q9H244 342 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 THAP1Q9NVV9 213 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 PKD2L2Q9NZM6 624 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 XPR1Q9UBH6 696 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 MED16Q9Y2X0 877 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 PCDHB1Q9Y5F3 818 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 AGAP14A8MT82 685 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 TGDSO95455 350 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 RBP1P09455 135 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 ZNF7P17097 686 aaPredicted RBP21.44■■□□□ 1.02
USP6NL-204ENST00000606752 OCRLQ01968 901 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 CTSL3PQ5NE16 218 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 DPPA4Q7L190 304 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 PIP4K2CQ8TBX8 421 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 SYTL2Q9HCH5 934 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 FBRSL1Q9HCM7 1045 aaKnown RBP21.44■■□□□ 1.02
USP6NL-204ENST00000606752 CRLS1Q9UJA2 301 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 FAM50BQ9Y247 325 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 ARL2BPQ9Y2Y0 163 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 KIAA1549LQ6ZVL6 1849 aa21.44■■□□□ 1.02
USP6NL-204ENST00000606752 H3BQ06 376 aaPredicted RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 TRIM13O60858 407 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 PYGLP06737 847 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 TROVE2P10155 538 aaKnown RBP eCLIP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 ZNF37AP17032 561 aaPredicted RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 ITGB7P26010 798 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 ACRV1P26436 265 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 SOX9P48436 509 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 GALK1P51570 392 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 EGFLAMQ63HQ2 1017 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 ERAP2Q6P179 960 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 RFLNAQ6ZTI6 216 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 PARS2Q7L3T8 475 aaKnown RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 SUGP1Q8IWZ8 645 aaKnown RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 RBFAQ8N0V3 343 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 OR6Y1Q8NGX8 325 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 UNKQ9C0B0 810 aaKnown RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 OXSMQ9NWU1 459 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 BRWD1Q9NSI6 2320 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 VPS26AO75436 327 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 EPHX1P07099 455 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 HNRNPLP14866 589 aaKnown RBP eCLIP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 RPS3P23396 243 aaKnown RBP eCLIP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 CA5AP35218 305 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 SKIV2L2P42285 1042 aaKnown RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 ITGA9Q13797 1035 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 E2F5Q15329 346 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 SETMARQ53H47 684 aaPredicted RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 TECRLQ5HYJ1 363 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 C6orf89Q6UWU4 347 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 DSG4Q86SJ6 1040 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 SPNS2Q8IVW8 549 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 KCNJ9Q92806 393 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 FAM136AQ96C01 138 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 ACOX2Q99424 681 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 GAS2L1Q99501 681 aaPredicted RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 CLPBQ9H078 707 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 KLHL14Q9P2G3 628 aa21.43■■□□□ 1.02
USP6NL-204ENST00000606752 MTF2Q9Y483 593 aaPredicted RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 OAS3Q9Y6K5 1087 aaKnown RBP21.43■■□□□ 1.02
USP6NL-204ENST00000606752 ANTXRLA6NF34 631 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 TNFRSF4P43489 277 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 PRKAA2P54646 552 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 OVGP1Q12889 678 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 RALGDSQ12967 914 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 AAK1Q2M2I8 961 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 PAQR3Q6TCH7 311 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 NXPE1Q8N323 547 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 GPR21Q99679 349 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 P2RY13Q9BPV8 354 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 PLCD4Q9BRC7 762 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 TRIM55Q9BYV6 548 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 PRSS16Q9NQE7 514 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 RAD18Q9NS91 495 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 CACNA2D2Q9NY47 1150 aa21.42■■□□□ 1.02
USP6NL-204ENST00000606752 MUC22E2RYF6 1773 aaPredicted RBP21.41■■□□□ 1.02
USP6NL-204ENST00000606752 GRXCR2A6NFK2 248 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 GOLGA8CPA6NN73 597 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 H2AFYO75367 372 aaKnown RBP21.41■■□□□ 1.02
USP6NL-204ENST00000606752 CHRM3P20309 590 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 MMP12P39900 470 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 SLC1A6P48664 564 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 HNRNPH2P55795 449 aaKnown RBP21.41■■□□□ 1.02
USP6NL-204ENST00000606752 UGT3A1Q6NUS8 523 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 HSD11B1LQ7Z5J1 315 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 ISCA2Q86U28 154 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 THOC1Q96FV9 657 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms