RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ZCCHC2Q9C0B9 1178 aaKnown RBP11.46□□□□□ -0.57
CCDC12-209ENST00000604164 CARD9Q9H257 536 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 SUDS3Q9H7L9 328 aaPredicted RBP11.46□□□□□ -0.57
CCDC12-209ENST00000604164 CAAP1Q9H8G2 361 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 TRIM39Q9HCM9 518 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 TAAR2Q9P1P5 351 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 ZNHIT2Q9UHR6 403 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 APPL1Q9UKG1 709 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 TMEM98Q9Y2Y6 226 aa11.46□□□□□ -0.57
CCDC12-209ENST00000604164 ACACBO00763 2458 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 TPRP12270 2363 aaKnown RBP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 GOLGA6L3A6NEY3 463 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 RHPN2P1A8MT19 583 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 VEGFDO43915 354 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 CSO75390 466 aaKnown RBP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 CRTAMO95727 393 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 BPIP17213 487 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 ACTR1BP42025 376 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 POLD2P49005 469 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 ACTR1AP61163 376 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 CYP4F3Q08477 520 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 KLF1Q13351 362 aaPredicted RBP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 ITGA9Q13797 1035 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 HLTFQ14527 1009 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 CLPPQ16740 277 aaPredicted RBP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 PARP6Q2NL67 630 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 PERM1Q5SV97 790 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 ALS2CLQ60I27 953 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 KCTD16Q68DU8 428 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 AADACL2Q6P093 401 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 SLC30A9Q6PML9 568 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 MARK2Q7KZI7 788 aaKnown RBP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 TRIM74Q86UV6 250 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 CCNJLQ8IV13 435 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 GPR26Q8NDV2 337 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 CCL4L1Q8NHW4 92 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 BLOC1S5Q8TDH9 187 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 MAIP1Q8WWC4 291 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 GLYATL1Q969I3 302 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 EID2BQ96D98 161 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 TMEM74Q96NL1 305 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 VPS35Q96QK1 796 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 GFM1Q96RP9 751 aaKnown RBP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 WDR24Q96S15 920 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 AGAP2Q99490 1192 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 C19orf43Q9BQ61 176 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 HERPUD2Q9BSE4 406 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 STRADBQ9C0K7 418 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 STN1Q9H668 368 aaKnown RBP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 SYNDIG1Q9H7V2 258 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 GRPEL1Q9HAV7 217 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 LZTFL1Q9NQ48 299 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 LRIT1Q9P2V4 623 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 CNOT6Q9ULM6 557 aaKnown RBP11.45□□□□□ -0.58
CCDC12-209ENST00000604164 LRP4O75096 1905 aa11.45□□□□□ -0.58
CCDC12-209ENST00000604164 A0A0U1RQJ8 604 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 FADS2P1A8MWK0 482 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 F5H423 210 aaPredicted RBP11.44□□□□□ -0.58
CCDC12-209ENST00000604164 NTN3O00634 580 aaPredicted RBP11.44□□□□□ -0.58
CCDC12-209ENST00000604164 STX7O15400 261 aaKnown RBP11.44□□□□□ -0.58
CCDC12-209ENST00000604164 GRID2O43424 1007 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 NUAK1O60285 661 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 NOBOXO60393 691 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 DNAJC6O75061 913 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 FUCA1P04066 466 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 ATP1A1P05023 1023 aaKnown RBP11.44□□□□□ -0.58
CCDC12-209ENST00000604164 VCLP18206 1134 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 LPOP22079 712 aaPredicted RBP11.44□□□□□ -0.58
CCDC12-209ENST00000604164 PSMB4P28070 264 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 SPAM1P38567 509 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 GPR3P46089 330 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 EIF3IQ13347 325 aaKnown RBP11.44□□□□□ -0.58
CCDC12-209ENST00000604164 GTF2H3Q13889 308 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 TAF1AQ15573 450 aaPredicted RBP11.44□□□□□ -0.58
CCDC12-209ENST00000604164 ISXQ2M1V0 245 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 MEI1Q5TIA1 1274 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 RANBP10Q6VN20 620 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 NRROSQ86YC3 692 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 FAM71DQ8N9W8 422 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 GDAP1Q8TB36 358 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 SLC35B2Q8TB61 432 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 CCDC110Q8TBZ0 833 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 MDM1Q8TC05 714 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 TTC25Q96NG3 672 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 FICDQ9BVA6 458 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 LRRN3Q9H3W5 708 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 C10orf88Q9H8K7 445 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 SPATS2LQ9NUQ6 558 aaKnown RBP11.44□□□□□ -0.58
CCDC12-209ENST00000604164 IL17CQ9P0M4 197 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 SPO11Q9Y5K1 396 aa11.44□□□□□ -0.58
CCDC12-209ENST00000604164 GOLGA4Q13439 2230 aaKnown RBP11.43□□□□□ -0.58
CCDC12-209ENST00000604164 PLXNB3Q9ULL4 1909 aa11.43□□□□□ -0.58
CCDC12-209ENST00000604164 GLYATL1P3A0A0U1RQE8 302 aa11.43□□□□□ -0.58
CCDC12-209ENST00000604164 OR5K4A6NMS3 321 aa11.43□□□□□ -0.58
CCDC12-209ENST00000604164 SRRM3A6NNA2 597 aaPredicted RBP11.43□□□□□ -0.58
CCDC12-209ENST00000604164 ERI2A8K979 691 aaKnown RBP11.43□□□□□ -0.58
CCDC12-209ENST00000604164 KMOO15229 486 aa11.43□□□□□ -0.58
CCDC12-209ENST00000604164 KCNJ13O60928 360 aa11.43□□□□□ -0.58
CCDC12-209ENST00000604164 USP12O75317 370 aa11.43□□□□□ -0.58
CCDC12-209ENST00000604164 GAS8O95995 478 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms