RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 CLCNKAP51800 687 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 PDX1P52945 283 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 GEMP55040 296 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 DAB2P98082 770 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 OLIG2Q13516 323 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 C1orf61Q13536 156 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 HLTFQ14527 1009 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSBP4-208ENST00000600628 RPS6KA1Q15418 735 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 PCSK7Q16549 785 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 PARP6Q2NL67 630 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 KHDC1Q4VXA5 237 aaKnown RBP8.72□□□□□ -1.01
SSBP4-208ENST00000600628 CERCAMQ5T4B2 595 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 RAET1GQ6H3X3 334 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 GUSBP11Q6P575 273 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 DARS2Q6PI48 645 aaKnown RBP8.72□□□□□ -1.01
SSBP4-208ENST00000600628 RASGEF1CQ8N431 466 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 TRAM1L1Q8N609 369 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 ARL10Q8N8L6 244 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 CCL4L1Q8NHW4 92 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 CCDC110Q8TBZ0 833 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 CCHCR1Q8TD31 782 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 PPP1R2P1Q96PQ5 205 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 CYP4F12Q9HCS2 524 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 LZTFL1Q9NQ48 299 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 RSPH14Q9UHP6 348 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 CD84Q9UIB8 345 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 APPL1Q9UKG1 709 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 SHOC2Q9UQ13 582 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 DRG1Q9Y295 367 aaKnown RBP8.72□□□□□ -1.01
SSBP4-208ENST00000600628 ZKSCAN5Q9Y2L8 839 aa8.72□□□□□ -1.01
SSBP4-208ENST00000600628 AAR2Q9Y312 384 aaKnown RBP8.72□□□□□ -1.01
SSBP4-208ENST00000600628 AHCTF1Q8WYP5 2266 aa8.71□□□□□ -1.01
SSBP4-208ENST00000600628 GOLGA6L9A6NEM1 432 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 TRABD2BA6NFA1 517 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 TAF4O00268 1085 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 CASC3O15234 703 aaKnown RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 LDB2O43679 373 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 NUAK1O60285 661 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 SUN1O94901 812 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 AP2A1O95782 977 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 ANXA6P08133 673 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 MYF5P13349 255 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 DUSP3P51452 185 aaPredicted RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF140P52738 457 aaPredicted RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 XIAPP98170 497 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 CTBSQ01459 385 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 SQSTM1Q13501 440 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 LRP8Q14114 963 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 RTP5Q14D33 572 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 CCNG2Q16589 344 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 P3H1Q32P28 736 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 ATP13A5Q4VNC0 1218 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 PERM1Q5SV97 790 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 HES3Q5TGS1 186 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 ZDHHC20Q5W0Z9 365 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 DENND2CQ68D51 928 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 XKR5Q6UX68 686 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 KDELC2Q7Z4H8 507 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 C11orf96Q7Z7L8 435 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 TRIM74Q86UV6 250 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 GKN2Q86XP6 184 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF547Q8IVP9 402 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 SFTPA2Q8IWL1 248 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 NAGSQ8N159 534 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 PDCD7Q8N8D1 485 aaKnown RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 FAM71DQ8N9W8 422 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 GLIS1Q8NBF1 620 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 KYQ8NBH2 561 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 IPMKQ8NFU5 416 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 OR6C4Q8NGE1 309 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 BRSK1Q8TDC3 778 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 ATG4AQ8WYN0 398 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 ZCCHC14Q8WYQ9 949 aaKnown RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 NAT6Q93015 286 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 GLYATL1Q969I3 302 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 TMEM121Q9BTD3 319 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 CCDC86Q9H6F5 360 aaKnown RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 RMI1Q9H9A7 625 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 CARS2Q9HA77 564 aaKnown RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 TRIM39Q9HCM9 518 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 SPATS2LQ9NUQ6 558 aaKnown RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 EVA1BQ9NVM1 165 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 SMOXQ9NWM0 555 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 FEZ2Q9UHY8 353 aaPredicted RBP8.71□□□□□ -1.02
SSBP4-208ENST00000600628 RABGEF1Q9UJ41 708 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 PADI4Q9UM07 663 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 PTPRQQ9UMZ3 2332 aa8.71□□□□□ -1.02
SSBP4-208ENST00000600628 KALRNO60229 2985 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 TRBV5-4A0A0C4DH59 114 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 A0A1W2PNU3 283 aaPredicted RBP8.7□□□□□ -1.02
SSBP4-208ENST00000600628 MROH6A6NGR9 719 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 H7C0S8 307 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 NUDT21O43809 227 aaKnown RBP8.7□□□□□ -1.02
SSBP4-208ENST00000600628 TCEA3O75764 348 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 KRT37O76014 449 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 CTSEP14091 401 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 FASLGP48023 281 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 CLDN6P56747 220 aa8.7□□□□□ -1.02
SSBP4-208ENST00000600628 TARDBPQ13148 414 aaKnown RBP eCLIP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms