RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 KCTD6Q8NC69 237 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 FAM71BQ8TC56 605 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 HSPH1Q92598 858 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 ART4Q93070 314 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 KCTD15Q96SI1 283 aaPredicted RBP9.35□□□□□ -0.91
COPE-210ENST00000600528 DPYSL5Q9BPU6 564 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 SUV39H2Q9H5I1 410 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 NOL6Q9H6R4 1146 aaKnown RBP9.35□□□□□ -0.91
COPE-210ENST00000600528 PCDH12Q9NPG4 1184 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.35□□□□□ -0.91
COPE-210ENST00000600528 SLC39A1Q9NY26 324 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 KCNK4Q9NYG8 393 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 PDP2Q9P2J9 529 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 UBA2Q9UBT2 640 aaPredicted RBP9.35□□□□□ -0.91
COPE-210ENST00000600528 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
COPE-210ENST00000600528 PCDHA3Q9Y5H8 950 aa9.35□□□□□ -0.91
COPE-210ENST00000600528 LOC101059948A0A1B0GTJ6 334 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 PRAMEF11O60813 436 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 FUCA1P04066 466 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 PCCBP05166 539 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 CCNB1P14635 433 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 ERCC2P18074 760 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 XPAP23025 273 aaPredicted RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 KDELR1P24390 212 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 MSNP26038 577 aaKnown RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 OAS2P29728 719 aaKnown RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 CSTF2P33240 577 aaKnown RBP eCLIP9.34□□□□□ -0.91
COPE-210ENST00000600528 CTNNA1P35221 906 aaKnown RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 ARSEP51690 589 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 CDH6P55285 790 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 MAZP56270 477 aaKnown RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 RAB15P59190 212 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 POLR2LP62875 67 aaKnown RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 DPYSQ14117 519 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 KRT81Q14533 505 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 CYTH1Q15438 398 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 CA9Q16790 459 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 ATP13A4Q4VNC1 1196 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 ODF2Q5BJF6 829 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 PPP6R3Q5H9R7 873 aaPredicted RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 RALGPS1Q5JS13 557 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 ZNF569Q5MCW4 686 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 DCAF12Q5T6F0 453 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 TCTN3Q6NUS6 607 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 ERAP2Q6P179 960 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 BRAT1Q6PJG6 821 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 TMCO3Q6UWJ1 677 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 TIPARPQ7Z3E1 657 aaKnown RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 KATNAL2Q8IYT4 538 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 NLGN4XQ8N0W4 816 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 C17orf53Q8N3J3 647 aaPredicted RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 NLGN4YQ8NFZ3 816 aaPredicted RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 EXD1Q8NHP7 514 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 NSMCE1Q8WV22 266 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 KRT35Q92764 455 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 RTP4Q96DX8 246 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 HES6Q96HZ4 224 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 TEFMQ96QE5 360 aaKnown RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 LGR4Q9BXB1 951 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 GPN2Q9H9Y4 310 aaPredicted RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 PCDH18Q9HCL0 1135 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 CYP4F12Q9HCS2 524 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 TRNAU1APQ9NX07 287 aaKnown RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 OCIAD1Q9NX40 245 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 LHX3Q9UBR4 397 aa9.34□□□□□ -0.91
COPE-210ENST00000600528 TMEM184BQ9Y519 407 aaPredicted RBP9.34□□□□□ -0.91
COPE-210ENST00000600528 ARHGEF17Q96PE2 2063 aaPredicted RBP9.33□□□□□ -0.92
COPE-210ENST00000600528 IGHV1OR21-1A0A087WYE8 117 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 PRSS38A1L453 326 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 LRRD1A4D1F6 860 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 RHPN2P1A8MT19 583 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 ZNF487B1APH4 448 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 PPM1DO15297 605 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 RECQL5O94762 991 aaPredicted RBP9.33□□□□□ -0.92
COPE-210ENST00000600528 ZRANB2O95218 330 aaKnown RBP eCLIP9.33□□□□□ -0.92
COPE-210ENST00000600528 PIGNO95427 931 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 ECEL1O95672 775 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 KRT1P04264 644 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 GM2AP17900 193 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 SERPINA4P29622 427 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 CSF2RBP32927 897 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 DEKP35659 375 aaKnown RBP9.33□□□□□ -0.92
COPE-210ENST00000600528 MARCKSL1P49006 195 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 PAPOLAP51003 745 aaKnown RBP9.33□□□□□ -0.92
COPE-210ENST00000600528 MLLT10P55197 1068 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 RWDD2BP57060 319 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 GNG11P61952 73 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 MC2RQ01718 297 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 MC1RQ01726 317 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 ABHD18Q0P651 414 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 RALGDSQ12967 914 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 RPS6KA1Q15418 735 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 DEFB109BQ30KR1 87 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 CFAP58Q5T655 872 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 ANKS6Q68DC2 871 aa9.33□□□□□ -0.92
COPE-210ENST00000600528 CAPRIN2Q6IMN6 1127 aaKnown RBP9.33□□□□□ -0.92
COPE-210ENST00000600528 TMEM71Q6P5X7 295 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms