RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 PPM1DO15297 605 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 FGF3P11487 239 aaPredicted RBP17.32■□□□□ 0.36
HOMER3-210ENST00000599097 GJC1P36383 396 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 UBASH3AP57075 661 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 TBR1Q16650 682 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 LINC00303Q3SY05 128 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 NCBP2-AS2Q69YL0 99 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 CAVIN1Q6NZI2 390 aaKnown RBP17.32■□□□□ 0.36
HOMER3-210ENST00000599097 BORAQ6PGQ7 559 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 ZNF574Q6ZN55 896 aaPredicted RBP17.32■□□□□ 0.36
HOMER3-210ENST00000599097 LYSMD3Q7Z3D4 306 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 CACNA2D3Q8IZS8 1091 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 EXD3Q8N9H8 876 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 CCNYQ8ND76 341 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 LPCAT1Q8NF37 534 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 SLC37A2Q8TED4 501 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 PATE1Q8WXA2 126 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 SCAMP4Q969E2 229 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 HDAC11Q96DB2 347 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 SRPK1Q96SB4 655 aaKnown RBP17.32■□□□□ 0.36
HOMER3-210ENST00000599097 FAM83DQ9H4H8 585 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 GEMIN8Q9NWZ8 242 aaKnown RBP17.32■□□□□ 0.36
HOMER3-210ENST00000599097 PDP2Q9P2J9 529 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 CAPN11Q9UMQ6 739 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 CHKBQ9Y259 395 aa17.32■□□□□ 0.36
HOMER3-210ENST00000599097 TLN1Q9Y490 2541 aaKnown RBP17.31■□□□□ 0.36
HOMER3-210ENST00000599097 EFCAB7A8K855 629 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 INPP4BO15327 924 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 MTA2O94776 668 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 MAP3K6O95382 1288 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 H2AFZP0C0S5 128 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 MAP4P27816 1152 aaKnown RBP17.31■□□□□ 0.36
HOMER3-210ENST00000599097 MC1RQ01726 317 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 DSC2Q02487 901 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 PDPK2PQ6A1A2 396 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 TXNRD3NBQ6F5E7 133 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 CYB5D1Q6P9G0 228 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 H2AFVQ71UI9 128 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 CHST15Q7LFX5 561 aaPredicted RBP17.31■□□□□ 0.36
HOMER3-210ENST00000599097 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 CCDC13Q8IYE1 715 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 NKD1Q969G9 470 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 MLPHQ9BV36 600 aaPredicted RBP17.31■□□□□ 0.36
HOMER3-210ENST00000599097 SLC25A18Q9H1K4 315 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 CARD9Q9H257 536 aa17.31■□□□□ 0.36
HOMER3-210ENST00000599097 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.31■□□□□ 0.36
HOMER3-210ENST00000599097 A0A087X0T9 212 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 ZNF487B1APH4 448 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 PROSCO94903 275 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 FAM87AP0C7U9 286 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 FAM228BP0C875 321 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 F3P13726 295 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 IL4RP24394 825 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 CSF2RBP32927 897 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 UGT1A3P35503 534 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 SPINT3P49223 89 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 FANCCQ00597 558 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 MMRN1Q13201 1228 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 IQCB1Q15051 598 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 ODF2Q5BJF6 829 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 ZNF569Q5MCW4 686 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.3■□□□□ 0.36
HOMER3-210ENST00000599097 HENMT1Q5T8I9 393 aaKnown RBP17.3■□□□□ 0.36
HOMER3-210ENST00000599097 NKAIN2Q5VXU1 208 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 TRIM74Q86UV6 250 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 PLXDC1Q8IUK5 500 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 NLGN4XQ8N0W4 816 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 NLGN4YQ8NFZ3 816 aaPredicted RBP17.3■□□□□ 0.36
HOMER3-210ENST00000599097 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.3■□□□□ 0.36
HOMER3-210ENST00000599097 BTBD6Q96KE9 485 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 ZSCAN5AQ9BUG6 496 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 B3GALT1Q9Y5Z6 326 aa17.3■□□□□ 0.36
HOMER3-210ENST00000599097 LILRA5A6NI73 299 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 ANKRD66B4E2M5 251 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 RAD1O60671 282 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 DNAJC6O75061 913 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 CLDN7O95471 211 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 ZFXP17010 805 aaPredicted RBP17.29■□□□□ 0.36
HOMER3-210ENST00000599097 TNNT3P45378 269 aaPredicted RBP17.29■□□□□ 0.36
HOMER3-210ENST00000599097 CCR10P46092 362 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 ARSEP51690 589 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 DCDC1P59894 354 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 CCDC70Q6NSX1 233 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 IYDQ6PHW0 289 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.29■□□□□ 0.36
HOMER3-210ENST00000599097 PTCD2Q8WV60 388 aaKnown RBP17.29■□□□□ 0.36
HOMER3-210ENST00000599097 FAF2Q96CS3 445 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 XPO4Q9C0E2 1151 aaKnown RBP17.29■□□□□ 0.36
HOMER3-210ENST00000599097 BRD8Q9H0E9 1235 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 GPN2Q9H9Y4 310 aaPredicted RBP17.29■□□□□ 0.36
HOMER3-210ENST00000599097 FBXO8Q9NRD0 319 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 IL17BQ9UHF5 180 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 ST14Q9Y5Y6 855 aa17.29■□□□□ 0.36
HOMER3-210ENST00000599097 PPP1R12AO14974 1030 aaPredicted RBP17.28■□□□□ 0.36
HOMER3-210ENST00000599097 GRID2O43424 1007 aa17.28■□□□□ 0.36
HOMER3-210ENST00000599097 HLA-DQB2P05538 268 aa17.28■□□□□ 0.36
HOMER3-210ENST00000599097 CD48P09326 243 aa17.28■□□□□ 0.36
HOMER3-210ENST00000599097 ACP5P13686 325 aa17.28■□□□□ 0.36
HOMER3-210ENST00000599097 VCLP18206 1134 aa17.28■□□□□ 0.36
HOMER3-210ENST00000599097 PTMSP20962 102 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms