RNA–Protein interactions for RNA: ENST00000599078.1

LINC00664-203, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 3,760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-203ENST00000599078 PGAP3Q96FM1 320 aaPredicted RBP12.84□□□□□ -0.35
LINC00664-203ENST00000599078 FUBP3Q96I24 572 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC00664-203ENST00000599078 ERVK-6Q9BXR3 956 aa12.84□□□□□ -0.35
LINC00664-203ENST00000599078 ELOVL6Q9H5J4 265 aa12.84□□□□□ -0.35
LINC00664-203ENST00000599078 OPTCQ9UBM4 332 aa12.84□□□□□ -0.35
LINC00664-203ENST00000599078 SCML2Q9UQR0 700 aa12.84□□□□□ -0.35
LINC00664-203ENST00000599078 Q9Y3F1 56 aa12.84□□□□□ -0.35
LINC00664-203ENST00000599078 ZNF711Q9Y462 761 aa12.84□□□□□ -0.35
LINC00664-203ENST00000599078 ZNF623O75123 536 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 URODP06132 367 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 CD1EP15812 388 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 PBLDP30039 288 aaPredicted RBP12.83□□□□□ -0.35
LINC00664-203ENST00000599078 HTR7P34969 479 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 GSSP48637 474 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 XIAPP98170 497 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 GRB7Q14451 532 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 LRRC73Q5JTD7 316 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 C16orf87Q6PH81 154 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 OR2T34Q8NGX1 318 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 OR2T3Q8NH03 318 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 ITFG1Q8TB96 612 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 RPL10LQ96L21 214 aaKnown RBP12.83□□□□□ -0.35
LINC00664-203ENST00000599078 BTBD9Q96Q07 612 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 TCF12Q99081 682 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.83□□□□□ -0.35
LINC00664-203ENST00000599078 TNKS2Q9H2K2 1166 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.35
LINC00664-203ENST00000599078 CIDEBQ9UHD4 219 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 DOCK3Q8IZD9 2030 aa12.83□□□□□ -0.35
LINC00664-203ENST00000599078 ECI2O75521 394 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 GJB5O95377 273 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 S1PR4O95977 384 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 CAPN1P07384 714 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 ALPIP09923 528 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 CKBP12277 381 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 UGT1A1P22309 533 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 UGT1A4P22310 534 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 UGT1A3P35503 534 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 UGT1A5P35504 534 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 ARHGDIAP52565 204 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 ATP6V0D1P61421 351 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 VAC14Q08AM6 782 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 SEMA3BQ13214 749 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 TLR1Q15399 786 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 RABL3Q5HYI8 236 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 RAB41Q5JT25 222 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 FAM91A1Q658Y4 838 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 FAM171BQ6P995 826 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 CPSF7Q8N684 471 aaKnown RBP12.83□□□□□ -0.36
LINC00664-203ENST00000599078 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
LINC00664-203ENST00000599078 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 RTP3Q9BQQ7 232 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 OSER1Q9NX31 292 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 ARL15Q9NXU5 204 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 LEF1Q9UJU2 399 aaPredicted RBP12.83□□□□□ -0.36
LINC00664-203ENST00000599078 PTGES3LE9PB15 166 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 OR1I1O60431 355 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 LRATO95237 230 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.36
LINC00664-203ENST00000599078 CLIC3O95833 236 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 IDO1P14902 403 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 LIPEQ05469 1076 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 CCDC81Q6ZN84 652 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 GCNT7Q6ZNI0 430 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 LRRC8DQ7L1W4 858 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 RASAL3Q86YV0 1011 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 FBXO22Q8NEZ5 403 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 ZNF483Q8TF39 744 aaPredicted RBP12.83□□□□□ -0.36
LINC00664-203ENST00000599078 TMEM74Q96NL1 305 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 SPATA16Q9BXB7 569 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 PNMA8BQ9ULN7 279 aaPredicted RBP12.83□□□□□ -0.36
LINC00664-203ENST00000599078 U3KQV3 271 aa12.83□□□□□ -0.36
LINC00664-203ENST00000599078 SMIM31A0A1B0GVY4 71 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 SLC38A8A6NNN8 435 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 PRMT5O14744 637 aaPredicted RBP12.82□□□□□ -0.36
LINC00664-203ENST00000599078 CLDN11O75508 207 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 GSNP06396 782 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 AP5B1Q2VPB7 878 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 PRMT9Q6P2P2 845 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 B3GNT6Q6ZMB0 384 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 GRIN3AQ8TCU5 1115 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 CD99L2Q8TCZ2 262 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 AUTS2Q8WXX7 1259 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 FAM120BQ96EK7 910 aaKnown RBP12.82□□□□□ -0.36
LINC00664-203ENST00000599078 C9orf16Q9BUW7 83 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00664-203ENST00000599078 GMPR2Q9P2T1 348 aaKnown RBP12.82□□□□□ -0.36
LINC00664-203ENST00000599078 MTMR11A4FU01 709 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 HHLA1C9JL84 531 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 CDK14O94921 469 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 MLYCDO95822 493 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 NNMTP40261 264 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 EPHB3P54753 998 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 SATB1Q01826 763 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 TUBB3Q13509 450 aa12.82□□□□□ -0.36
LINC00664-203ENST00000599078 CRY1Q16526 586 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms