RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TRNAU1APQ9NX07 287 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 NCKIPSDQ9NZQ3 722 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 SIRPGQ9P1W8 387 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 MOSPD1Q9UJG1 213 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 TMPRSS11EQ9UL52 423 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GPR34Q9UPC5 381 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 PLEKHM1Q9Y4G2 1056 aa10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 URB1O60287 2271 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-206ENST00000595523 GAPDHSO14556 408 aaPredicted RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 BUD23O43709 281 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 LIASO43766 372 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 OPA1O60313 960 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 DNAJC6O75061 913 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 USP12O75317 370 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 STK10O94804 968 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 PTMAP06454 111 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 PROS1P07225 676 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 CA5AP35218 305 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 ADCY8P40145 1251 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 DUSP3P51452 185 aaPredicted RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 CTBSQ01459 385 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 SPARCL1Q14515 664 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 KHDC1Q4VXA5 237 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 PYCR3Q53H96 274 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 ZNF648Q5T619 568 aaPredicted RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 DENND5AQ6IQ26 1287 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 CCDC70Q6NSX1 233 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 MARK2Q7KZI7 788 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 EFL1Q7Z2Z2 1120 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 TAF8Q7Z7C8 310 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 TRAM1L1Q8N609 369 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 DCBLD1Q8N8Z6 715 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 TRIM58Q8NG06 486 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 BLOC1S5Q8TDH9 187 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 UBE2Q2Q8WVN8 375 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 C1orf54Q8WWF1 131 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 RTP4Q96DX8 246 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 PDLIM2Q96JY6 352 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 ALS2CR12Q96Q35 445 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 SRPK1Q96SB4 655 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 FERMT1Q9BQL6 677 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 ZSCAN5AQ9BUG6 496 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 SPATA16Q9BXB7 569 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 CDH19Q9H159 772 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 TRABDQ9H4I3 376 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 ARFGAP3Q9NP61 516 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 SPATS2LQ9NUQ6 558 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 IL17CQ9P0M4 197 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 VPS18Q9P253 973 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 GULP1Q9UBP9 304 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 PADI4Q9UM07 663 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 DOLKQ9UPQ8 538 aa10.9□□□□□ -0.66
SHKBP1-206ENST00000595523 GPR39O43194 453 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 E2F1Q01094 437 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 TARDBPQ13148 414 aaKnown RBP eCLIP10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 HLTFQ14527 1009 aaKnown RBP eCLIP10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 PTPRCAPQ14761 206 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 ZNF569Q5MCW4 686 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 GLT6D1Q7Z4J2 308 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 C17orf82Q86X59 251 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 REXO1L1PQ8IX06 675 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 GLIS1Q8NBF1 620 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 FAM46DQ8NEK8 389 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 MAPK15Q8TD08 544 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 PATE1Q8WXA2 126 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 SCG3Q8WXD2 468 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 GLMNQ92990 594 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 GLYATL1Q969I3 302 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 PLEKHG4BQ96PX9 1271 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 OR2M4Q96R27 311 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 IL26Q9NPH9 171 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 HACD3Q9P035 362 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 TAAR2Q9P1P5 351 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 ATXN10Q9UBB4 475 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 AAR2Q9Y312 384 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 PRKAB1Q9Y478 270 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 KCTD3Q9Y597 815 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 ARL5AQ9Y689 179 aa10.89□□□□□ -0.67
SHKBP1-206ENST00000595523 TRABD2BA6NFA1 517 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 B4DGG1 531 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 NRDCO43847 1150 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 MTX2O75431 263 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 ZNF189O75820 626 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 ASMTLO95671 621 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 EML2O95834 649 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 MT-CO3P00414 261 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 JUPP14923 745 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 ZNF8P17098 575 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 CXCR5P32302 372 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 RPIAP49247 311 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 PDX1P52945 283 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 ILF3Q12906 894 aaKnown RBP eCLIP10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 PARP6Q2NL67 630 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 ATP13A5Q4VNC0 1218 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 CERCAMQ5T4B2 595 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 PDPK2PQ6A1A2 396 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 SLC30A9Q6PML9 568 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 ARHGEF18Q6ZSZ5 1173 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 ADGRG6Q86SQ4 1221 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms