RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 TTC7AQ9ULT0 858 aaPredicted RBP14.45□□□□□ -0.1
VRK3-206ENST00000594090 DRG1Q9Y295 367 aaKnown RBP14.45□□□□□ -0.1
VRK3-206ENST00000594090 ERI2A8K979 691 aaKnown RBP14.44□□□□□ -0.1
VRK3-206ENST00000594090 BUD23O43709 281 aaKnown RBP14.44□□□□□ -0.1
VRK3-206ENST00000594090 PPFIA2O75334 1257 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 ASMTLO95671 621 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 SPINK2P20155 84 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 KCNJ1P48048 391 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 ILKQ13418 452 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 NR0B2Q15466 257 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 DHRS13Q6UX07 377 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 MARK2Q7KZI7 788 aaKnown RBP14.44□□□□□ -0.1
VRK3-206ENST00000594090 TAF8Q7Z7C8 310 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 PHYKPLQ8IUZ5 450 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 SLC35F3Q8IY50 421 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 CCL4L1Q8NHW4 92 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 BRSK1Q8TDC3 778 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 GPBAR1Q8TDU6 330 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 COG1Q8WTW3 980 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 SCG3Q8WXD2 468 aaKnown RBP14.44□□□□□ -0.1
VRK3-206ENST00000594090 VPS35Q96QK1 796 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 IL26Q9NPH9 171 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 TRNAU1APQ9NX07 287 aaKnown RBP14.44□□□□□ -0.1
VRK3-206ENST00000594090 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.44□□□□□ -0.1
VRK3-206ENST00000594090 NCKIPSDQ9NZQ3 722 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 SNX12Q9UMY4 172 aa14.44□□□□□ -0.1
VRK3-206ENST00000594090 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
VRK3-206ENST00000594090 BPTFQ12830 3046 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 C2orf81A6NN90 581 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 PGRMC1O00264 195 aaKnown RBP14.43□□□□□ -0.1
VRK3-206ENST00000594090 CES2O00748 559 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 STX7O15400 261 aaKnown RBP14.43□□□□□ -0.1
VRK3-206ENST00000594090 DNAJC6O75061 913 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 SLC25A14O95258 325 aaPredicted RBP14.43□□□□□ -0.1
VRK3-206ENST00000594090 ZSCAN5DPP0CG00 497 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 LPOP22079 712 aaPredicted RBP14.43□□□□□ -0.1
VRK3-206ENST00000594090 ADCY8P40145 1251 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 DUSP3P51452 185 aaPredicted RBP14.43□□□□□ -0.1
VRK3-206ENST00000594090 ILF3Q12906 894 aaKnown RBP eCLIP14.43□□□□□ -0.1
VRK3-206ENST00000594090 SEMA5AQ13591 1074 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 PTPRCAPQ14761 206 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 ATP13A5Q4VNC0 1218 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 PYCR3Q53H96 274 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 GUSBP11Q6P575 273 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 FAM151BQ6UXP7 276 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 GSTA5Q7RTV2 222 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 LINC00523Q86TU6 105 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 GALNT13Q8IUC8 556 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 ARL10Q8N8L6 244 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 KYQ8NBH2 561 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 FAM46DQ8NEK8 389 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 DTX3LQ8TDB6 740 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 GLMNQ92990 594 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 OR2M4Q96R27 311 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 NAP1L3Q99457 506 aaPredicted RBP14.43□□□□□ -0.1
VRK3-206ENST00000594090 SCNM1Q9BWG6 230 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 GSDMCQ9BYG8 508 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 ARFGAP3Q9NP61 516 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 RAB6BQ9NRW1 208 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 SMARCAL1Q9NZC9 954 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 KLK13Q9UKR3 277 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 TMPRSS11EQ9UL52 423 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 GPR34Q9UPC5 381 aa14.43□□□□□ -0.1
VRK3-206ENST00000594090 PCYT1BQ9Y5K3 369 aaPredicted RBP14.43□□□□□ -0.1
VRK3-206ENST00000594090 GLYATL1P3A0A0U1RQE8 302 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 GAPDHSO14556 408 aaPredicted RBP14.42□□□□□ -0.1
VRK3-206ENST00000594090 CRTAMO95727 393 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 CDK4P11802 303 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 AK4P27144 223 aaPredicted RBP14.42□□□□□ -0.1
VRK3-206ENST00000594090 RPL22P35268 128 aaKnown RBP14.42□□□□□ -0.1
VRK3-206ENST00000594090 ZNF140P52738 457 aaPredicted RBP14.42□□□□□ -0.1
VRK3-206ENST00000594090 GNG11P61952 73 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 PDE1BQ01064 536 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 CHRNA6Q15825 494 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 ZNF648Q5T619 568 aaPredicted RBP14.42□□□□□ -0.1
VRK3-206ENST00000594090 NRROSQ86YC3 692 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 OR4K2Q8NGD2 314 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 IFI44Q8TCB0 444 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 ACTRT1Q8TDG2 376 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 AP1M1Q9BXS5 423 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 RMI1Q9H9A7 625 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 TRIM39Q9HCM9 518 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 PIH1D1Q9NWS0 290 aaKnown RBP14.42□□□□□ -0.1
VRK3-206ENST00000594090 SIRPGQ9P1W8 387 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 ATXN10Q9UBB4 475 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 GPSM3Q9Y4H4 160 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 KCTD3Q9Y597 815 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 ST14Q9Y5Y6 855 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 PTPRBP23467 1997 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 SPTBN2O15020 2390 aa14.42□□□□□ -0.1
VRK3-206ENST00000594090 EME2A4GXA9 379 aaPredicted RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 GPR89AB7ZAQ6 455 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 E7EVH7 732 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 ZNF185O15231 689 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 GPR39O43194 453 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 LDB2O43679 373 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 SUN1O94901 812 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 PRAMEF1O95521 474 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 GP1BAP07359 652 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 GPR89BP0CG08 455 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms