RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 RTP5Q14D33 572 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 RPS6KA1Q15418 735 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 CCDC6Q16204 474 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 TBRG1Q3YBR2 411 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ARTNQ5T4W7 220 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ETFRF1Q6IPR1 90 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 C19orf48Q6RUI8 117 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SERPINA13PQ6UXR4 307 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ZNF572Q7Z3I7 529 aaPredicted RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ZNF280BQ86YH2 543 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ARHGAP12Q8IWW6 846 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 PLD5Q8N7P1 536 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 KDM1BQ8NB78 822 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ATAD1Q8NBU5 361 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 PLA2G15Q8NCC3 412 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 MNS1Q8NEH6 495 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 CCDC148Q8NFR7 591 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 TNIP2Q8NFZ5 429 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 OR56B2PQ8NGI1 322 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ST7LQ8TDW4 575 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ZCCHC14Q8WYQ9 949 aaKnown RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SUSD6Q92537 303 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 MAP4K1Q92918 833 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 GCDHQ92947 438 aaPredicted RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SMARCE1Q969G3 411 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 DTNBP1Q96EV8 351 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 FAM84BQ96KN1 310 aaPredicted RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 C5orf34Q96MH7 638 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ZSWIM3Q96MP5 696 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 GDAP1L1Q96MZ0 367 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 PLEKHF1Q96S99 279 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 INTS14Q96SY0 518 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 NUDT22Q9BRQ3 303 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ERP44Q9BS26 406 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 C11orf84Q9BUA3 381 aaPredicted RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SLC25A23Q9BV35 468 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 HEMGNQ9BXL5 484 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SLC46A2Q9BY10 475 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 MRPL1Q9BYD6 325 aaKnown RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 TRIM31Q9BZY9 425 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 PNNQ9H307 717 aaKnown RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 NMRK1Q9NWW6 199 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SOHLH2Q9NX45 425 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 UTP6Q9NYH9 597 aaKnown RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 RAI14Q9P0K7 980 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SEPT10Q9P0V9 454 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ARMCX3Q9UH62 379 aaPredicted RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 AMACRQ9UHK6 382 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 CDH22Q9UJ99 828 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 CROTQ9UKG9 612 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SUFUQ9UMX1 484 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SORCS3Q9UPU3 1222 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 ASB3Q9Y575 518 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 PCDHA10Q9Y5I2 948 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 CDY1Q9Y6F8 540 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.25□□□□□ -1.73
LINC00649-204ENST00000593977 MCM3APO60318 1980 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 PTPRSQ13332 1948 aa4.25□□□□□ -1.73
LINC00649-204ENST00000593977 SIPA1L1O43166 1804 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 LOC105369274A0A096LPK9 316 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 LOC102723532A0A0G2JNH3 316 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 TCRBV7S2A1N4TA0A589 114 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 TCRBV21S2A2A0A5A6 115 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 DDTLA6NHG4 134 aaPredicted RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 M0QX08 132 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 CTAGE5O15320 804 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 MAGEB3O15480 346 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 PAPSS1O43252 624 aaPredicted RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 B4GALT4O60513 344 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 NEMFO60524 1076 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 RASAL1O95294 804 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 SIX3O95343 332 aaPredicted RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 PRB1P04280 392 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 ZFYP08048 801 aaPredicted RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 MMP2P08253 660 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 PEPDP12955 493 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 ATF2P15336 505 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 TRIM21P19474 475 aaKnown RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 SSTR4P31391 388 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 STIP1P31948 543 aaKnown RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 RFC2P35250 354 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 CPOXP36551 454 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 DHPSP49366 369 aaPredicted RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 DIO1P49895 249 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 GBX2P52951 348 aaPredicted RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 TIRAPP58753 221 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 STX1BP61266 288 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 DEFB103AP81534 67 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 KIF5AQ12840 1032 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 RIPK1Q13546 671 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 THOC5Q13769 683 aaKnown RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 FRG1Q14331 258 aaKnown RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 RRP1BQ14684 758 aaKnown RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 ZIK1Q3SY52 487 aaPredicted RBP4.24□□□□□ -1.73
LINC00649-204ENST00000593977 IGSF11Q5DX21 431 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 ZNF569Q5MCW4 686 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 CYP4A22Q5TCH4 519 aa4.24□□□□□ -1.73
LINC00649-204ENST00000593977 CENPPQ6IPU0 288 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms