RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 PKD2L2Q9NZM6 624 aa16.05■□□□□ 0.16
CIRBP-241ENST00000593048 SEPT10Q9P0V9 454 aa16.05■□□□□ 0.16
CIRBP-241ENST00000593048 TRBV23OR9-2A0A075B6M9 112 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 APOL1O14791 398 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 GPR3P46089 330 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 PPIDQ08752 370 aaKnown RBP16.04■□□□□ 0.16
CIRBP-241ENST00000593048 IHHQ14623 411 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 CLPPQ16740 277 aaPredicted RBP16.04■□□□□ 0.16
CIRBP-241ENST00000593048 PYCR3Q53H96 274 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 DNTTIP2Q5QJE6 756 aaKnown RBP16.04■□□□□ 0.16
CIRBP-241ENST00000593048 TMEM164Q5U3C3 297 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 TMPRSS9Q7Z410 1059 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 ZNF438Q7Z4V0 828 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 RFX6Q8HWS3 928 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 RHOT2Q8IXI1 618 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 RAVER1Q8IY67 606 aaKnown RBP16.04■□□□□ 0.16
CIRBP-241ENST00000593048 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
CIRBP-241ENST00000593048 USP7Q93009 1102 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 FAM83DQ9H4H8 585 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 NHEJ1Q9H9Q4 299 aaPredicted RBP16.04■□□□□ 0.16
CIRBP-241ENST00000593048 LUC7LQ9NQ29 371 aaKnown RBP16.04■□□□□ 0.16
CIRBP-241ENST00000593048 KCNK4Q9NYG8 393 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 PPP2R2CQ9Y2T4 447 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 PCDHB11Q9Y5F2 797 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 ST14Q9Y5Y6 855 aa16.04■□□□□ 0.16
CIRBP-241ENST00000593048 MGAQ8IWI9 3026 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 PRAMEF33A0A0G2JMD5 474 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 ANKRD66B4E2M5 251 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 PPM1DO15297 605 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 PRAMEF10O60809 474 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 ATP1A1P05023 1023 aaKnown RBP16.03■□□□□ 0.16
CIRBP-241ENST00000593048 TNNT1P13805 278 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 ZFXP17010 805 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-241ENST00000593048 SPINT3P49223 89 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 LRP8Q14114 963 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 PDK1Q15118 436 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 QPCTQ16769 361 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 NKAIN2Q5VXU1 208 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 KIAA1614Q5VZ46 1190 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 PCSK4Q6UW60 755 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 CHST15Q7LFX5 561 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-241ENST00000593048 PLD5Q8N7P1 536 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 WBP1Q96G27 269 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 AHCYL2Q96HN2 611 aaKnown RBP16.03■□□□□ 0.16
CIRBP-241ENST00000593048 COX14Q96I36 57 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 LYSMD1Q96S90 227 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 CHP1Q99653 195 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 NUDT22Q9BRQ3 303 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 ACSL6Q9UKU0 697 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
CIRBP-241ENST00000593048 CFAP46Q8IYW2 2715 aa16.03■□□□□ 0.16
CIRBP-241ENST00000593048 RGSL1A5PLK6 1076 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 ZNF487B1APH4 448 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 PPP1R12AO14974 1030 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-241ENST00000593048 KRT1P04264 644 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 MMP2P08253 660 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 LIPCP11150 499 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 CD1CP29017 333 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 ETV5P41161 510 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 IFI35P80217 286 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-241ENST00000593048 ZBTB17Q13105 803 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 GALNT3Q14435 633 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 NR1D2Q14995 579 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 C16orf72Q14CZ0 275 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 TGIF1Q15583 401 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 KIF26BQ2KJY2 2108 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 KDELC2Q7Z4H8 507 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 ZNF605Q86T29 641 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 NT5DC3Q86UY8 548 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 ZNF843Q8N446 348 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 RCBTB1Q8NDN9 531 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 RNF25Q96BH1 459 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-241ENST00000593048 AGAP3Q96P47 875 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 SLC38A3Q99624 504 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 CEP41Q9BYV8 373 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 VPS18Q9P253 973 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 PRKAB1Q9Y478 270 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 ADGRG1Q9Y653 693 aa16.02■□□□□ 0.16
CIRBP-241ENST00000593048 ZNF462Q96JM2 2506 aa16.02■□□□□ 0.15
CIRBP-241ENST00000593048 IGHV1OR21-1A0A087WYE8 117 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 IGHV5-10-1A0A0J9YXX1 117 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 HGSO14964 777 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-241ENST00000593048 NDUFA10O95299 355 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 LCA5LO95447 670 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 DYNLT1P63172 113 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 LY6DQ14210 128 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 PCSK7Q16549 785 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 MANEAQ5SRI9 462 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 SLC9A4Q6AI14 798 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 NPNTQ6UXI9 565 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 ZNF574Q6ZN55 896 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-241ENST00000593048 ZFAND4Q86XD8 727 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 VSIG1Q86XK7 387 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 RHOT1Q8IXI2 618 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 CNTD1Q8N815 330 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 OR4D9Q8NGE8 314 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 KIF18AQ8NI77 898 aa16.01■□□□□ 0.15
CIRBP-241ENST00000593048 CCDC74BQ96LY2 380 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms