RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 TTC9Q92623 222 aa15.96■□□□□ 0.15
CIRBP-240ENST00000592815 RNF25Q96BH1 459 aaPredicted RBP15.96■□□□□ 0.15
CIRBP-240ENST00000592815 KCNK4Q9NYG8 393 aa15.96■□□□□ 0.15
CIRBP-240ENST00000592815 PKD2L2Q9NZM6 624 aa15.96■□□□□ 0.15
CIRBP-240ENST00000592815 FOXJ2Q9P0K8 574 aa15.96■□□□□ 0.15
CIRBP-240ENST00000592815 SEPT10Q9P0V9 454 aa15.96■□□□□ 0.15
CIRBP-240ENST00000592815 OAS3Q9Y6K5 1087 aaKnown RBP15.96■□□□□ 0.15
CIRBP-240ENST00000592815 IGHV1OR21-1A0A087WYE8 117 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 RGSL1A5PLK6 1076 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 ZNF487B1APH4 448 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 DNAJC6O75061 913 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 KRT1P04264 644 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 MPSTP25325 297 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 LY6DQ14210 128 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 GALNT3Q14435 633 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 ODF2Q5BJF6 829 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 B4GALNT4Q76KP1 1039 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 CHST15Q7LFX5 561 aaPredicted RBP15.95■□□□□ 0.14
CIRBP-240ENST00000592815 ZNF605Q86T29 641 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 RFX6Q8HWS3 928 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 RHOT2Q8IXI1 618 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 CCDC74BQ96LY2 380 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 AGAP3Q96P47 875 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 VPS18Q9P253 973 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 PCYT1BQ9Y5K3 369 aaPredicted RBP15.95■□□□□ 0.14
CIRBP-240ENST00000592815 ATMQ13315 3056 aa15.95■□□□□ 0.14
CIRBP-240ENST00000592815 CFAP46Q8IYW2 2715 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 FADS2P1A8MWK0 482 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 C9orf172C9J069 976 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 HGSO14964 777 aaPredicted RBP15.94■□□□□ 0.14
CIRBP-240ENST00000592815 MFAP3LO75121 409 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 MTA2O94776 668 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 EML2O95834 649 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 LIPCP11150 499 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 ZFXP17010 805 aaPredicted RBP15.94■□□□□ 0.14
CIRBP-240ENST00000592815 PPM1FP49593 454 aaPredicted RBP15.94■□□□□ 0.14
CIRBP-240ENST00000592815 LIMK2P53671 638 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 DYNLT1P63172 113 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 SRSF6Q13247 344 aaKnown RBP15.94■□□□□ 0.14
CIRBP-240ENST00000592815 SQSTM1Q13501 440 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 HENMT1Q5T8I9 393 aaKnown RBP15.94■□□□□ 0.14
CIRBP-240ENST00000592815 TMEM164Q5U3C3 297 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 LRRC38Q5VT99 294 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 LYSMD3Q7Z3D4 306 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 NT5DC3Q86UY8 548 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 VSIG1Q86XK7 387 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 ZNF761Q86XN6 746 aaPredicted RBP15.94■□□□□ 0.14
CIRBP-240ENST00000592815 RNF214Q8ND24 703 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 OR4D9Q8NGE8 314 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 SLC37A2Q8TED4 501 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 IMP4Q96G21 291 aaKnown RBP15.94■□□□□ 0.14
CIRBP-240ENST00000592815 SLC38A3Q99624 504 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 SEMA4CQ9C0C4 833 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 TSPY26PQ9H489 355 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 ZFYVE1Q9HBF4 777 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 SHOC2Q9UQ13 582 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 HYOU1Q9Y4L1 999 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 PCDHB11Q9Y5F2 797 aa15.94■□□□□ 0.14
CIRBP-240ENST00000592815 HELZ2Q9BYK8 2649 aaKnown RBP15.93■□□□□ 0.14
CIRBP-240ENST00000592815 PPP1R12AO14974 1030 aaPredicted RBP15.93■□□□□ 0.14
CIRBP-240ENST00000592815 SNX2O60749 519 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 PIRTP0C851 137 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 FGF3P11487 239 aaPredicted RBP15.93■□□□□ 0.14
CIRBP-240ENST00000592815 SLC1A1P43005 524 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 TRA2AQ13595 282 aaKnown RBP eCLIP15.93■□□□□ 0.14
CIRBP-240ENST00000592815 PCSK7Q16549 785 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 MANEAQ5SRI9 462 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 RHOT1Q8IXI2 618 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 SFRP1Q8N474 314 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 EID2BQ96D98 161 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 AHCYL2Q96HN2 611 aaKnown RBP15.93■□□□□ 0.14
CIRBP-240ENST00000592815 OLFM3Q96PB7 478 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 TRIB3Q96RU7 358 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 SPATA16Q9BXB7 569 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 SLC25A51Q9H1U9 297 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 RMI1Q9H9A7 625 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 ARFGAP3Q9NP61 516 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 DDX56Q9NY93 547 aaKnown RBP15.93■□□□□ 0.14
CIRBP-240ENST00000592815 TMEM9Q9P0T7 183 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 TBC1D29Q9UFV1 150 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 KCNK6Q9Y257 313 aa15.93■□□□□ 0.14
CIRBP-240ENST00000592815 ACP5P13686 325 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 COMTP21964 271 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 CD82P27701 267 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 CSF2RBP32927 897 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 CSTF2P33240 577 aaKnown RBP eCLIP15.92■□□□□ 0.14
CIRBP-240ENST00000592815 FASLGP48023 281 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 GPLD1P80108 840 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 CDK18Q07002 472 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 NFATC2Q13469 925 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 ZNF648Q5T619 568 aaPredicted RBP15.92■□□□□ 0.14
CIRBP-240ENST00000592815 ALS2CLQ60I27 953 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 TMEM71Q6P5X7 295 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 IYDQ6PHW0 289 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 MFSD7Q6UXD7 560 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 VASH2Q86V25 355 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 AGBL5Q8NDL9 886 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 GPR26Q8NDV2 337 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 OR10G6Q8NH81 332 aa15.92■□□□□ 0.14
CIRBP-240ENST00000592815 SPATA22Q8NHS9 363 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms